| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6138 |
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| Symbol | |
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| ID | 4315042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | - |
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| Start bp | 699427 |
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| End bp | 701001 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638153982 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_778016 |
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| Protein GI | 115360879 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | [TIGR01733] amino acid adenylation domain
[TIGR03098] acyl-CoA ligase (AMP-forming), exosortase system type 1 associated |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.623044 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.113053 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCAC TGATCAGCAT CGCCGACCTG CTCGAGCGCG GCGCGCAGCG CTGGCCGCAC
CATGTCGCCT ATGCCGACGG CGGTGGCCGG ATGACCTACG AACAGCTCGC GCATGCGGTG
CGGCGCGCCG CCACCGTGCT CACCGCACGC GGCGTCCGGC CCGGCGAGCG CATCGCGATC
TACGCGCCCA AGCGAATCGA AACCGTGGTC GCAATGCTCG CGGCCAACGC GCTCGGCGCG
ATCTTCGTGC CGGTCAATCC GCAATTGAAG GAAGCGCAGA TCGAGCACAT CGTCACCGAC
AGCGGCGCGG CGCTGTTCGT CACCGGCGCG CAGCGCCTGA AGCGGCTGCC GGCGCTCGCG
CCGCTCGTCG GCACGCGTGC GCTCCTGATC GAGGAGCTGA CCGACGCGAT CTTCGCGTCG
GACGCCGGCG ACGCATCGCA CGCGGCCGGC CGGCCCGTCG ACGACGATCC GGCCGCGCTG
CTCTATACGT CCGGCTCGAC CGGCAAGCCG AAGGGCGTGG TCGTCTCGCA CCGCAATCTC
GTGTCGGGCG CGTTCAGCGT CGCCGCCTAC CAGCAACTGG CCGACGACGA CGTCGTGCTC
GGCGTGCTGC CGCTCAGCTT CGACGCGGGC CTGAGCCAGC TCACGACCGC GCTGGCGTCC
GGCGCCTGCT ATGCGCCGCT CGACTTCCTG CAGCCGGCCG AGGTGCCGCG CCACTGCGAC
GCGTTCGGCG TCACGTCGAT CACCGGCGTG CCGCCGCTGT GGATGCAGCT CGCGTCCGCC
GGCTGGAGCG ACACCGCACG CGCGCGGATC CGCCGCTTCG CGAACACCGG CGGCCATCTC
GCGACGCCGC TGCTGCAGCG CCTGCAGGCG CTGTTCACGC ACGCCGACCC GTACCTGATG
TACGGGCTGA CCGAAGCGTT CCGCTCGACC TACCTGCCGC CCGCGGATGC GGCGTTGCGC
CCGACGTCGA TCGGCAAGGC CGTGCCGAAC GCGGAGATCC TCGTGCTGCG CGCCGACGGC
AGCGAATGCG CGGCCGACGA GCCCGGCGAA CTCGTGCATC GCGGCGCGTT CGTCACGCTC
GGCTACTGGA ACCGGCCCGA GCTGACCGCG CAGCGCTTTC GCGCGCTGCC GCGCCGGCAT
GGTGAGATTC CGCGTCACGA CGTCGCCGTG TGGTCCGGCG ACATCGTGCG GCGCGACGCG
GACGGCTACC TGTACTTCGT CGCGCGCGGC GACGACATGA TCAAGACGTC CGGCTATCGC
GTGAGCCCGA CCGAAGTCGA GGACGTGCTG TTCGCGCTGC CGCATATCGC CGAAGCGGCG
GTGTTCGGCG TGCCGCACCC GGCGCTCGGC GAGGCGATCG CCGCCTGCGT CGTGTCAACG
CTCGACGCGG ATGCGTGCCG CGCCGACATC GCACGCGCAT GCCGCGAAGC GCTGCCGACC
TACATGAGCC CGCTCGTCGT CGAGCCGCTG CCCGCGCTGC CGCGCAATCC GAACGGCAAG
ATCGATCGCC CGGCGCTCAA AGCCCGCTAT CGCGAGACGT TCGCGAGCCC CAACCTCGAG
GAGACCGCCG CATGA
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| Protein sequence | MNALISIADL LERGAQRWPH HVAYADGGGR MTYEQLAHAV RRAATVLTAR GVRPGERIAI
YAPKRIETVV AMLAANALGA IFVPVNPQLK EAQIEHIVTD SGAALFVTGA QRLKRLPALA
PLVGTRALLI EELTDAIFAS DAGDASHAAG RPVDDDPAAL LYTSGSTGKP KGVVVSHRNL
VSGAFSVAAY QQLADDDVVL GVLPLSFDAG LSQLTTALAS GACYAPLDFL QPAEVPRHCD
AFGVTSITGV PPLWMQLASA GWSDTARARI RRFANTGGHL ATPLLQRLQA LFTHADPYLM
YGLTEAFRST YLPPADAALR PTSIGKAVPN AEILVLRADG SECAADEPGE LVHRGAFVTL
GYWNRPELTA QRFRALPRRH GEIPRHDVAV WSGDIVRRDA DGYLYFVARG DDMIKTSGYR
VSPTEVEDVL FALPHIAEAA VFGVPHPALG EAIAACVVST LDADACRADI ARACREALPT
YMSPLVVEPL PALPRNPNGK IDRPALKARY RETFASPNLE ETAA
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