Gene Bamb_6135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6135 
Symbol 
ID4315039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp695240 
End bp696490 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content75% 
IMG OID638153979 
Productcitrate synthase-like protein 
Protein accessionYP_778013 
Protein GI115360876 
COG category[C] Energy production and conversion 
COG ID[COG0372] Citrate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.822109 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0240059 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATACGA CGCTCGCCTC TGCTGCAAAC CCGACCGCAA CCGCTGCGAC CGGCGATGCG 
CCGCGCAACC TGCTCGGCCG CCCGGCCAGC CGCCATCGCG GCACCGACAT CGACGGCGCG
ACGCTCGAGC CCGAAGCGCT GCGCGTGCGC GATCTCGACC TGAACACGCT GATCGGCGCG
ACGACGTTCG AAGGCGCGCT CGCGCATCTG TGGTTCGACG TCGCGCCGGG CAGCGACGCG
CACCGCGCGC ATCAAGCGGC GCTCGGCGCG CGGCTGGCCG CGTTCGCCGC CGCGCTCGCG
CCCGGCTCGG CCGCGCAGTG CGTCGCCGCG GATCTCGGCG CGGCCGGCGT CGCGCCGGTG
TTCGCCGCCG CGTCCGGCCT GCTGCGCGGC TTCGACGACG TGCTCGCACG TGTGGACGGC
CACGCCCCGG ACGACGCCGA CCTTGATGCG ATGCTGCTGT GCGTGGCCGC CGCGCCGTTC
CTGTTGCATG CCGCGATCGA AGGCCGCCCG TTCGCCGCCC GCCACGACAA CGCCGCCACG
TCGCTCGACC ACGCATCGAC CCACGCGCAG CGCATGCTCG CGCTGACCGG CGCGACCCGC
GACGACGCGC CGGCGCAAGC CGCGATGAAC ATGCTGCTGG TCGCCTGGCA CGCCGGTTTC
GGCTACATCA CGCCGACCGT GCTCGCGCCG CGCGTCGCGA TCGGCACCGG CGTCACGCTG
ACGCAGGCGA TCGCGGCCGG CTTCCTCGCG AGCGGCCCGT CGCACGTCGG CGCCGCGCTC
GAGGCGATGC ACTGGCTCGG CGCGCTCGCG CGGTCGGTGC CGGGCGGCAC CACCGCGCCG
CACGCGGCGC TCGACGCCGC CGGCCGCACG GCGATCGATG CGGCGCTCGA CGCGAAACTC
ACGCTGTACG GCTTCGGCCA TCCGCTGTTC GTCGCCGATC CGCGTCCGCC GCACATGCGC
CGGCAGTTCG CCGAACGCGG TTTCGACGGC GCGTACCTGA CGCTGTTCGA CGCGTGCTGC
GCGCAGGCCG ATGCGCGCCG CGCCCTGCGA CCGAACATCG ATTTCCTGAC GGCGGCCACG
CTGCTCGACC TCGGCGTTAC GGCGCCGTCG TGGGGCGTCG GCATCGGGCT CGGCGCGCGC
ATCGCCGCGA TGGCCGCGCA TGCGGTCGAG CGCCGGCGCC GTCCCGCATT CGGCGTCAAC
AGCGCGACCG CGCGACGGCT GCTGGCCGCC GTGCCGGTCG GCTGGCTGTG A
 
Protein sequence
MDTTLASAAN PTATAATGDA PRNLLGRPAS RHRGTDIDGA TLEPEALRVR DLDLNTLIGA 
TTFEGALAHL WFDVAPGSDA HRAHQAALGA RLAAFAAALA PGSAAQCVAA DLGAAGVAPV
FAAASGLLRG FDDVLARVDG HAPDDADLDA MLLCVAAAPF LLHAAIEGRP FAARHDNAAT
SLDHASTHAQ RMLALTGATR DDAPAQAAMN MLLVAWHAGF GYITPTVLAP RVAIGTGVTL
TQAIAAGFLA SGPSHVGAAL EAMHWLGALA RSVPGGTTAP HAALDAAGRT AIDAALDAKL
TLYGFGHPLF VADPRPPHMR RQFAERGFDG AYLTLFDACC AQADARRALR PNIDFLTAAT
LLDLGVTAPS WGVGIGLGAR IAAMAAHAVE RRRRPAFGVN SATARRLLAA VPVGWL