| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6131 |
|---|
| Symbol | |
|---|
| ID | 4315035 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008392 |
|---|
| Strand | - |
|---|
| Start bp | 691367 |
|---|
| End bp | 692443 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638153975 |
|---|
| Product | ABC-2 type transporter |
|---|
| Protein accession | YP_778009 |
|---|
| Protein GI | 115360872 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.862302 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0100987 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACTAAGG TATTTCTGAT CCTCGTGCGC AACGAGCTGC TCGGCTATCT GCGCAGCCGC
TCGTCGCTGT TCTGGACGCT GGTGTTCCCG GTGTTCCTGC TGAGCGTGAT GCTGTTCGCG
TTCGGCGGCT CGGGCTCGCT CGGCACGGCC GACATCGCGT TCGACGTGCC GGGCGGCCCG
AGCGCCTATA GCCGCGCATG CGAAGCGCAG ATCGTCGACA GCCTGTCGCA CAGCGACACG
GTGAAAGCGA CGTTCGGCCG CGGCACGGCC GCCGATCGCG TGACCGTCGT GCTGGGCGCC
GACGAACGCA CGCCGGCGAC GATCCGCTAC GACTTCAACG GCTCGCTCGC GGTGAAGGCC
GCATCGCGGG TCGTCGAGAT CGCGCTCGCG CGCTGCGCCG CGCAGCGGCT CGGCGTGCCG
GCCGCGCAGG CGCGCTTCGA GAACAGCGCC CCGGCGCGCC GGCCGTTCGA CTATGGCGCG
TTCTTCGCGA CCGGCCTGCT GGTGATGGCG TTCATGGCGA TCGGGCTGAA CTCGACGACG
ACCGCGATCG CCGCGCTGCG TGAACGCAAT ACGTTCAAGC TCTACGTGTG CTTCCCGGTG
TCGCGCGGCG TGTTTCTGGC CGCGCTGATC GTCGCGCGGA TGGTGATGAT GGCGCTGTCC
GCGCTCGTGC TGCTGACCGT CGCGCGCGTC GCGTTCGGCA TCGCGCTGCC GATCGCGGGC
CCGGACGGGC TGCGCGCATT GCCGATCGTG CTGCTCGGCG CGGCGATGCT GCTCAGCATC
GGCGTGCTGC TCGCGAGCCG CACGCGCTCG CTTGCGGCCG CCGAACTCGC GTGCAACGTC
ACCTACTATC CGCTGCTGTT CTTCAGCGAC CTGACGATTC CGATGCACGA CGCACCGGCC
TGGCTGAAAA CCGCGCTCGC GTTCCTGCCG ACCAACCAGT TCGCCGTCGC GCTGCGCGGC
ACGCTGCTCG ACGGCGCATC GTACGTGCAA CTCGCGCCGC AACTGCTCGG GATGGCCGCG
AGCACGGCGC TGTTCCTGTT TGCCGCCGCG CGGCTGTTCC GCTGGCATGA CGCATGA
|
|---|
| Protein sequence | MTKVFLILVR NELLGYLRSR SSLFWTLVFP VFLLSVMLFA FGGSGSLGTA DIAFDVPGGP
SAYSRACEAQ IVDSLSHSDT VKATFGRGTA ADRVTVVLGA DERTPATIRY DFNGSLAVKA
ASRVVEIALA RCAAQRLGVP AAQARFENSA PARRPFDYGA FFATGLLVMA FMAIGLNSTT
TAIAALRERN TFKLYVCFPV SRGVFLAALI VARMVMMALS ALVLLTVARV AFGIALPIAG
PDGLRALPIV LLGAAMLLSI GVLLASRTRS LAAAELACNV TYYPLLFFSD LTIPMHDAPA
WLKTALAFLP TNQFAVALRG TLLDGASYVQ LAPQLLGMAA STALFLFAAA RLFRWHDA
|
|---|
| |