Gene Bamb_6119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6119 
Symbol 
ID4315023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp680654 
End bp681031 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content56% 
IMG OID638153963 
ProductMerR family transcriptional regulator 
Protein accessionYP_777997 
Protein GI115360860 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0529361 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0458667 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCG GCGAACTATG CAAGCGGGCG GGCGTTTCGC ACGATACCGT GCGCTACTAC 
GAGCGAATGG GGCTGCTGGA CAAAGCAACA CAACCTCACG CGACAAATAC GTACAAGCAC
TACTCCGAAC GCTCGTTACA GCGGATACAG CTGATTATCC ATGCGAAGGC ATTAGGCTTC
ACGCTCACGG AAATTGGCGA CGTCATTCAT GTATGGGACA GTCCGACATT CGGTGTTGCG
AAAAAGGTCG CTTGTCTGCA AGCAAAGCTC ACAGAAATCG ACGAAAAGAG CCGCGCGCTG
ACCCTGCTGC GCGCAGGGCT GGTGAATGCG CTGGCCAAAG TTGGCAGCGA TTGTGTCGAA
GGACACATCG CGTGGTGA
 
Protein sequence
MRIGELCKRA GVSHDTVRYY ERMGLLDKAT QPHATNTYKH YSERSLQRIQ LIIHAKALGF 
TLTEIGDVIH VWDSPTFGVA KKVACLQAKL TEIDEKSRAL TLLRAGLVNA LAKVGSDCVE
GHIAW