Gene Bamb_6097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6097 
Symbol 
ID4315001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp656333 
End bp657835 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content72% 
IMG OID638153941 
ProductMlrC domain-containing protein 
Protein accessionYP_777975 
Protein GI115360838 
COG category[S] Function unknown 
COG ID[COG5476] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCC TGATCGCCCG GATGAATCAC GAGACGAACA CGTTCTCGCC GGTGCCGACG 
CCGCTCGCCG CGTTCGGTCG CAACGGCCCC GACTGGGGCG ACGACGCGTA TCGCGCGAAT
CACGGGATGC GCACCGCGAT GGCCGCGTTC CTCGACGCGG CCGAGCGTGA AGGCGCCGAG
ATCGTGACGC CCGTATCGGC GGCCGCCAAC CCGAGCGGCC CGGTCGCGGC CGATGCATAT
GCGGCGATCT GCGATGCGAT CGTCGCGGCC ACGCCAGGCT GCGACGCGGT GATGCTCGAT
CTGCACGGCG CGATGGTCGC CGAGCAATCC GCGGACGGCG AGGGCGACCT GCTCGCGCGC
GTGCGCGCCG CGCTGCCCGA TGCGCCGATC GCGGTGGCGC TCGACCTGCA CGCGAACGTC
ACGCAGAAGA TGATCGACCA CGCGGACGTG ATCGTCAGTT TCAAGACCTA TCCGCACGTC
GACATGTACG AGACGGGTGA GCATGCGGCA CGCGTGCTGC TCGAGCGGCT GCACGGCCGC
GCGCGGCCCG TGCTCGCATG GCGGCAGCCG CCGCTGATGA CGTCGACGCT GCGCAGCGCG
AGCGCCGAAG GCGCGATGCG GCGCGCGGTG GAGGCCGCGC GCGCGGCCGA GGCGGAGGGG
ATGCTCGCGG TGTCGGTGCT GCCCGGCTTC TCGCTCGCGG ATATTCCCGC GCCGTGTATC
AGCGTCGTGG TGGTCGCCGA CGGCGACCGT GCGGCAGCCG ATGCGGTGGC CGAGCGCATC
GCCCGGCAGA TCTGGGACGC GCGTGACGCG TTCGTGTACC GCAGCGCGCC GCTCGCGGAA
TCGGTCGCGC AGGCCGCGGC GCTGGCGCGC GGCGCGGACC GTCCGGTGCT GATGCTCGAT
CACGGCGACA ACTGCATGTC GGGCGGCCCA TGCGACACGA TGGACCTGCT CGAGGCCGCG
CTCGCGCAGG GGCTCGACGG GATCGTCAGC GGGCCGTTGT GCGATCCCGA AGCCGTCGCG
GCGCTGATCG ACGCGGGCGT GGGCGCGACC GTCACGGTGC CGGTCGGCAA CCGGATGCCG
TCGCATGGCG GCGCGCGGCG CGCACCGTTT CGCGCGACGG GCATCGTGCG CGCCATCACC
GACGGCGAAT ACGTGATTAC CGGGCCGACC TACACGGGCC AACGCGCATA CATGGGCCGC
GCGGCGGTGC TCGATATCGG CGTGGCGACG CTGGTCGTCA CCGAGCGCAC GCAGGAACCG
TGGGATCTCG GCGTGTTCGA GAGCGTCGGC GTCGATCCAC GCCGCGCACG ATTCCTGCTG
CTGAAGTCGC GCATGTATTG CCGGCCCGTG TTCGTGCCGA TCGCGGCCGC ACTCGTCGAG
TGCGACAGCC GCGGCGTGAC CGGGTCGGAC TTCGGGCTGT TCCGCTACGA GCGGCTCGCG
CGGCCCGTGT ATCCGCTCGA CGACGTTCGC CAGTGGGACG GCGCGGGGCC GCGCACTCGC
TGA
 
Protein sequence
MKILIARMNH ETNTFSPVPT PLAAFGRNGP DWGDDAYRAN HGMRTAMAAF LDAAEREGAE 
IVTPVSAAAN PSGPVAADAY AAICDAIVAA TPGCDAVMLD LHGAMVAEQS ADGEGDLLAR
VRAALPDAPI AVALDLHANV TQKMIDHADV IVSFKTYPHV DMYETGEHAA RVLLERLHGR
ARPVLAWRQP PLMTSTLRSA SAEGAMRRAV EAARAAEAEG MLAVSVLPGF SLADIPAPCI
SVVVVADGDR AAADAVAERI ARQIWDARDA FVYRSAPLAE SVAQAAALAR GADRPVLMLD
HGDNCMSGGP CDTMDLLEAA LAQGLDGIVS GPLCDPEAVA ALIDAGVGAT VTVPVGNRMP
SHGGARRAPF RATGIVRAIT DGEYVITGPT YTGQRAYMGR AAVLDIGVAT LVVTERTQEP
WDLGVFESVG VDPRRARFLL LKSRMYCRPV FVPIAAALVE CDSRGVTGSD FGLFRYERLA
RPVYPLDDVR QWDGAGPRTR