Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_6078 |
Symbol | |
ID | 4314982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008392 |
Strand | - |
Start bp | 638421 |
End bp | 639146 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638153922 |
Product | pirin domain-containing protein |
Protein accession | YP_777956 |
Protein GI | 115360819 |
COG category | [R] General function prediction only |
COG ID | [COG1741] Pirin-related protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.371082 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCGAGA CTCGTGCAGC AAACCAACGT GGCCACGCCG AGCATGGCTG GCTCAGCTCC CGTCACACGT TTTCGTTCGC GAACTACTAC GACCCGAAGC AAGTCGGCTT CTCCGATCTG CTGGTGATCA ACGACGACCG CGTCGCCCCG GGCCGCGGCT TCGGCACGCA CCCGCACCGC GACATGGAAA TCCTGTCGTA CGTGCTCGAC GGTGCGCTGG AGCACAAGGA TTCGATGGGC ACCGGGTCGG TGATCGTGCC GGGCGACGTC CAGTTGATGA GCGCGGGTAC CGGCGTGCGT CACAGCGAGT TCAACCACTC GCACGAAACG CCCGTCCACT TCCTGCAGAT CTGGGTCGGA CCGTCCGAGA AGGGTGCCGA GCCGCGCTAT CAGCAGACGA ATGTCGCGGA GGCCGACAAG CGCGGCAGGC TCACGCCGAT CGTGTCGCCC GACGGTAACG GCGGTTCGCT GAAGATCCGC CAGGACACGC GGATCTACGC CGGCCTGTTC GACGGCGACG AGCGCGCCAC GCTCGAACTG GCACCGGGCC GCTTCGCCTA CGTGCATGTC GCACGCGGCA GCGTGACGGT CAACGGCGTG ACGCTCGGCG AAGGTGACGG CGCACGCATC CGCGACGAAC AGGCGCTGAC GTTCGCCGAC GGCAAGGATG CCGAGGTGCT GGTATTCGAC CTGCGCCCGG TCGAAGTGAC GGCCGAGTGG GCGTGA
|
Protein sequence | MIETRAANQR GHAEHGWLSS RHTFSFANYY DPKQVGFSDL LVINDDRVAP GRGFGTHPHR DMEILSYVLD GALEHKDSMG TGSVIVPGDV QLMSAGTGVR HSEFNHSHET PVHFLQIWVG PSEKGAEPRY QQTNVAEADK RGRLTPIVSP DGNGGSLKIR QDTRIYAGLF DGDERATLEL APGRFAYVHV ARGSVTVNGV TLGEGDGARI RDEQALTFAD GKDAEVLVFD LRPVEVTAEW A
|
| |