Gene Bamb_6018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6018 
SymboleutB 
ID4314922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp571000 
End bp571971 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content70% 
IMG OID638153862 
Productthreonine dehydratase 
Protein accessionYP_777896 
Protein GI115360759 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1171] Threonine dehydratase 
TIGRFAM ID[TIGR02991] ectoine utilization protein EutB 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTTCC TGTCGCTGTC CGACGTCTAC CGCGCGCGCC GACGCATCGC CGGGCATGCG 
TGCGTCACGC CGCTCGTCAC GTCCACCGCG CTGTCCGCGC GGGCCGGCGC ACCCGTCCAT
CTGAAACTCG AAACGTTGCA GCCGACCGGC AGTTTCAAGC TGCGCGGCGC GGTCAACGCG
CTCGCTGAAC TCGCATCGCA GGGTGTGACG CGCGTCGTCA CCGCATCGAC CGGCAATCAC
GGCCGTGCGG TTGCGCATGC AGCGCGCGTA TTCGGCATCG AGGCCGCGGT CTGCATGTCG
TCGCTCGTGC CGGCCAACAA GGTGGACGCG GTCGCCGCGC TTGGCGCGCG GGTCGTGATC
GCGGGCGACA GCCAGGACGA CGCGCAGGCC GACGCGCGGC GTCTCGTGCG CGACGAAGGC
TATGCGTACG TGCCGCCGTT CGACGATCCG CGAATCATCG CCGGGCAGGC GACGATCGGC
GTCGAGATTC TCGAAGCGTT GCCCGAGGCG GCAACGCTCG TCGTGCCGCT GTCCGGCGGC
GGGCTGTTCA GCGGTGTCGC ACTCGCCGCG AAGGCGATCC GGCCGGCGAT CGAGGTGATC
GGCGTGTCGA TGACGCGCGG CGCCGCGATG CATGCGAGCC TCGAGGCCGG ACGCCCGGTC
GACGTCGACG AACGGCCGAC GCTCGCCGAT TCGCTCGGCG GCGGCATCGG CCTCGACAAC
CGCTACACGT TCGACATGAC GCGCGCGCTG GCCGACGGCG TCGTGCTGCT CGACGAGCCG
GCGATTGCGC GCGGCATCGC GCATGCGTAT CGCGAAGAGC GTCTCGTCGT GGAAGGCGCG
GGCGCGGTCG GCATCGCCGC GTTGCTGGAC GAACGGATCG CGCGCCGTGA TCGCGGCGGA
CCGATCGTCG TGATCGTCAG CGGTGCGAAC ATCGAGATGG CCGTGCATCG CCGGCTCGTT
TCGGAGAACT GA
 
Protein sequence
MSFLSLSDVY RARRRIAGHA CVTPLVTSTA LSARAGAPVH LKLETLQPTG SFKLRGAVNA 
LAELASQGVT RVVTASTGNH GRAVAHAARV FGIEAAVCMS SLVPANKVDA VAALGARVVI
AGDSQDDAQA DARRLVRDEG YAYVPPFDDP RIIAGQATIG VEILEALPEA ATLVVPLSGG
GLFSGVALAA KAIRPAIEVI GVSMTRGAAM HASLEAGRPV DVDERPTLAD SLGGGIGLDN
RYTFDMTRAL ADGVVLLDEP AIARGIAHAY REERLVVEGA GAVGIAALLD ERIARRDRGG
PIVVIVSGAN IEMAVHRRLV SEN