| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5930 |
|---|
| Symbol | |
|---|
| ID | 4314835 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008392 |
|---|
| Strand | - |
|---|
| Start bp | 458396 |
|---|
| End bp | 460180 |
|---|
| Gene Length | 1785 bp |
|---|
| Protein Length | 594 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638153770 |
|---|
| Product | carbamoyltransferase |
|---|
| Protein accession | YP_777809 |
|---|
| Protein GI | 115360672 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2192] Predicted carbamoyl transferase, NodU family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.054012 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGCA ACTACATCGG ACTCGGCACG AGTCCGCACG ATCCGTCGCT CGCGATCGTC
GATTCGCAGG GCCAGCTGGT GTTCGCCGAG GACGCGGAAC GCTATCTGCA GAACAAGCGC
GCCTGGAATG CTCCGCCCGA CGATTTCATC CGCATCGGCA AGCTGCTCGG CCAGTACTGC
GAGCCCGACG CGGAATTCGT GATCGTCGGC AGCTGGCGCC GGAAGTTCTT CAAGCGCTTG
CAGTTCTTCG CCTTCGGGCC GCTCAGGGGC ATGATCCGGC GCAAGATCGG CGCCGACAAT
TTCGACATGC TGCGCTGTAT CGCCAGCTAC GCGAACGTGC GCCACGGCAT CAACACCGAG
GCGCACCTGC AGCGCGTGTT CGGCCGGCGT CCCGTGATCC ACCGCGAATA CGAGCATCAC
CTGACCCACT CGGCGGCGGC CTGCTTCGGC AGCATCTTCT CCGACGCGAT CAGCATCGTG
ATCGACGGCC TTGGTGAATC GACCTCGTGC AAGGTGTTCC ACTTCGACCG CGGCGCGCAT
CGCGAGCTGT CGACCAAGCC CTCGCAGGGC AGCTTCGGCC AGTACTACAG TCTGCTCTGC
GAGCTGTGCG GCTTCGACCC GATCGGCGGC GAGGAGTGGA AGGTGATGGG CCTGGCACCC
TACGGCAGCC GCAACGAGCG CTACTACGGC CTGCTGCGCG GCCTGCTGGA AGTGGACGAC
CTGCGCATCC GCGAGGGGCG CGGCGCGGCG GCCGCGATCG GCGAGCTGGT CAAGCTGCGC
CGCACGCGCG ACCAGCCGGC GATCGAGTTC GCCGACCTCG CCTATACCGG GCAGCTCGTG
TTCGGCGAAT TCGTCGACGA GCTGCTGGCC AACGCGCATC GGCGCGGCCT GTCCGACAAC
CTGGTGCTGT CGGGCGGCTG CGCGCTGAAT TCGGCCTATG TCGGCAGCCT CGCGGGCCGC
GGCCCGTTCA GCCGCAGCCA TGTGTTCTGC GCGCCGGCCG ACAACGGCAA TTCGGTCGGT
GCCGCGTGGC TGGCCTATCA CGAGGATCAC CCGGGTGTCT GGCAGCCGCG CGCCGAGGTG
CAGTCGCCCT ATGTCGGCAG CCACCTGTCG AGCGACGCGC TTGGCAAGCT GCTGGAATAC
GGCGGCTTCG ACGCAGAGCG TGTCGCCGAC ACCGGCGAGC TGTGTCGGCG CGTCGCGACC
TCGCTGAGCG AGGGCAAGAT CGTCGCCTGG GTGCAGGGCC GCGCCGAGTT CGGCCCGCGT
GCGCTCGGCA ACCGCTCGAT CCTCGCCGAC CCGCGCGATG CCGACGTGAA GGAGCGGATC
AATGCGAGGG TGAAGTTCCG CGAGGAATTC CGGCCGTTTG CTCCGTCGAT CTTGGCCGAG
CATGCGCGGG CCTATTTCGA GCATGCCTGC GAGACGCCCT ACATGGAGCG CGCGCTGCGC
TTCCGCCCCG AGATGGCCCC GCGCGTGCCG GGCGTGGTGC ACGTGGACGG CACCGGGCGC
CTGCAGACCG TCAAGCGCGA GCTGAACCCG CGCTACCACG CGCTGATCGA GGCCTTCCAC
GCGATCACCG GCGTGCCGAT CCTGCTCAAT ACCAGCTTCA ACGTGATGGG CAAGCCGATC
GCGCACTCGG TCGAGGATGC GATCGCGATC TTCGCGACCA GCGGCATCGA CGTGCTGGTG
CTCGACGACG TAATCGTCCA CAAGGGCGGC GCGCGGCGCG AGACGCCGGC CGCGCGGCAG
TACGAGGCGC ACGGGGCGGA TACGTCGCTG GTGCTCGACG ACTAG
|
|---|
| Protein sequence | MKRNYIGLGT SPHDPSLAIV DSQGQLVFAE DAERYLQNKR AWNAPPDDFI RIGKLLGQYC
EPDAEFVIVG SWRRKFFKRL QFFAFGPLRG MIRRKIGADN FDMLRCIASY ANVRHGINTE
AHLQRVFGRR PVIHREYEHH LTHSAAACFG SIFSDAISIV IDGLGESTSC KVFHFDRGAH
RELSTKPSQG SFGQYYSLLC ELCGFDPIGG EEWKVMGLAP YGSRNERYYG LLRGLLEVDD
LRIREGRGAA AAIGELVKLR RTRDQPAIEF ADLAYTGQLV FGEFVDELLA NAHRRGLSDN
LVLSGGCALN SAYVGSLAGR GPFSRSHVFC APADNGNSVG AAWLAYHEDH PGVWQPRAEV
QSPYVGSHLS SDALGKLLEY GGFDAERVAD TGELCRRVAT SLSEGKIVAW VQGRAEFGPR
ALGNRSILAD PRDADVKERI NARVKFREEF RPFAPSILAE HARAYFEHAC ETPYMERALR
FRPEMAPRVP GVVHVDGTGR LQTVKRELNP RYHALIEAFH AITGVPILLN TSFNVMGKPI
AHSVEDAIAI FATSGIDVLV LDDVIVHKGG ARRETPAARQ YEAHGADTSL VLDD
|
|---|
| |