| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5864 |
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| Symbol | |
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| ID | 4314770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 340709 |
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| End bp | 341749 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638153705 |
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| Product | sctD; secretion-associated protein |
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| Protein accession | YP_777744 |
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| Protein GI | 115360607 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCGC TTCGAGTACT GACCGGCACC CACGCCGGAG CCCAGGTCCG GCTCACGAGC
GGCACCTACC GGATCGGCGC GACCGAGCAC TCGGATGTCT GCATCAGCGA CTGGACGGTC
GAGGACATCG AGCTTTGCGT GGGCGAGGAC GGTGTGGCGC GGATCCGCTC GGCGAACGGC
GATGAGGTGC TCTTGGCGGA CTTCGTGGCC GTGCCGTTCG GCGATGTCGT GTTGTGCGTG
GGCCCCGATG GCGAAGACTG GCCGCGCGAT CTCGATTTGC TGGCGGGCCT CTGGAAGACG
GCCGAGCCGC CTGCCGCCGA CACCGCGGCG GAGGCCGACG TGGATGGAGA CGCGCCGGAT
CGGGACCCGG CCCATGCGGA CGAACCCGGC ACCGGCCATG CGCCGGCCGC TTCGCCCAAG
GTGCCCTGGC GCACGGCCGT GCTGGCGCTC GCCTGCACCG CTGCGATCGG CGGCATCGCC
GTGACCGGTG TGATGTTCGC GGGCACGCAG TCGAGCGAAG CGGCGAGCGT GAGGTTCGAC
GCCGACGCGC TCGCACGGCA GTTGCAGGAG GCCCTGCACC GCGAAGGCCT CGGCGATCTG
CAGGCAATCG CACGCAAGGA CAGTGTTGCG GTGCGCGGCA TCGTGACGAG CGCCGACGAA
AGCGCGAAGG CGCAGCGGAT CATGGACAGC CTCGCGCGCG GCAAGGTGCG GCGCGAATAC
GACGTCGCGC AGCAAGACGT GGACAACATC CAGCAGTCGC TCGCCGGCAC GGGCGCGGCA
GTGAGTTACC AGGGCCACGG CGTCTTCCGC GTGAGCGGCA GCGTGCAGTC GATGACGACC
TTCCGCACGC TGATAGCAGG TGTCAGGGCC GACCTCGGCG ACAACGTCAA ACGCGTCGAC
GTCGATGTCA AGGAAGCGCA GGCGCTCGCG CCCGATGTCG AGTACACGGC GGTGATCGCC
ACGGGCGGGC TGCGTTACAT CGAGACGCCC GACGGCACGA AGCATCTGTT CGCGGGCAGC
AAGGACGAAG CAAACGATTG A
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| Protein sequence | MKALRVLTGT HAGAQVRLTS GTYRIGATEH SDVCISDWTV EDIELCVGED GVARIRSANG
DEVLLADFVA VPFGDVVLCV GPDGEDWPRD LDLLAGLWKT AEPPAADTAA EADVDGDAPD
RDPAHADEPG TGHAPAASPK VPWRTAVLAL ACTAAIGGIA VTGVMFAGTQ SSEAASVRFD
ADALARQLQE ALHREGLGDL QAIARKDSVA VRGIVTSADE SAKAQRIMDS LARGKVRREY
DVAQQDVDNI QQSLAGTGAA VSYQGHGVFR VSGSVQSMTT FRTLIAGVRA DLGDNVKRVD
VDVKEAQALA PDVEYTAVIA TGGLRYIETP DGTKHLFAGS KDEAND
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