Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5862 |
Symbol | |
ID | 4314768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008392 |
Strand | + |
Start bp | 339100 |
End bp | 339363 |
Gene Length | 264 bp |
Protein Length | 87 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638153703 |
Product | HrpO family type III secretion protein |
Protein accession | YP_777742 |
Protein GI | 115360605 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4794] Type III secretory pathway, component EscS |
TIGRFAM ID | [TIGR01403] type III secretion protein, HrpO family |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAACCG ATACGCTCGT TCGCATCACC TCGCAGGGCC TGCTGCTCTG CCTGTCCGTC TCGATGCCGG TGGTGGCCGT CGCCGCGCTC TCCGGCCTCG CGATTTCGTT CGTGCAGGCC ATTACGTCGA TGCAGGACCA AAGCATCTCG TACGCGGTGA AGCTCGTGGC CGTCGTGGCC ACCGTGCTCA TCACCGGCGC CTGGGGCGCC GCCGCGATCC TGCGCTTCGC CAATCAGATC ATCACGCTCG CGGTGCCATC ATGA
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Protein sequence | METDTLVRIT SQGLLLCLSV SMPVVAVAAL SGLAISFVQA ITSMQDQSIS YAVKLVAVVA TVLITGAWGA AAILRFANQI ITLAVPS
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