| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5782 |
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| Symbol | |
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| ID | 4314689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | - |
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| Start bp | 254640 |
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| End bp | 256274 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638153624 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_777663 |
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| Protein GI | 115360526 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.800296 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAAGA GACACTGGAT CGGCTCGTAT GGCTCGATCC CCGCCGAGAT CGATGCCGAT
CGCCATCCTT CCGTAACCGC GCTGCTGGAC GATGCGATGC GCCGCTTCGC GGCGCGCCCC
GCATTCCGCG CGTTCGGCCG CACGGTCACC TATGCCGACG TCGACCGCCT GTCGACCGCG
CTGGCCGCGT ACCTGCAGCA GGTCGCGGGC GTACGCAAGG GCGACCGCGT GGCCGTGATG
CTGCCCAACG TGCTCGCCTT TCCGGTGGTG TTCGTCGCGC TCGCGCGAAT CGGCGCGATC
CAGGTCAACG TGAACCCGCT CTACACCGCG CACGAGCTCG AACATCAGCT CAACGACGCG
GATGTCGAAG TGGCCGTGGT ATGCGGCGGA TCGATGGGCA CGTTCGCCGA CGTGGTCGGC
AGGACGCGCA TACGAACCGT GCTGAGCGTG GGCCGCGGCG ATCTCGGCGT CGTCGATGCG
CCGGCCGGCG CGTGCGACGC GCTGCCGCCG GGCTCGATCG CACTCGCTCA CGCGCTTGCC
GCGGGCGAGT CGCTCGTGGT CGAGCCGGTC GCGCTTGGCG GCGACGATCT GCTGCTGCTG
CAGTACACGG GCGGCACGAC CGGGCTGTCG AAGGGCGCCG CGCTGTCGCA TCGCAACCTG
GTCGCGAACA TCGCGCAGTT CGGCGCGATC GTGCCGGATT CGCGGCGGCC GGGCGAGGAG
GTCATCGTCA CGGCGATCCC GCTGTATCAC ATCTTCGCGC TGACGGTGAA CTTCCTGTCC
TACTTCGCGA TCGGCGCGGA GAACTGGCTC GTCGCGAATC CGCGCGACAT GGACGGCTTC
ATCGACGTGC TGAAGGCCGC GCGGCCGTCG GTGTTCGTCG GCGTCAACAC GCTGTATGCG
GGGCTCGTGG CCCAGCCGCG GCTGAACGAA GTCGACTGGT CGCGGCTGAC GCTGTCGGCC
GGCGGCGGCG CGGCGGTGAT CGACGTGATC TCCGCGCGCT GGAAGGCGGT GACGGGCAAC
TTCATCCGCG AAGGGTACGG GCTGTCGGAA ACGTCGCCGG TGGTCACGTT CAACCCGCAG
TCGATCGACG CGTTCACGGG CACGACGGGC CTGCCGCTGC CGTCGACCGA CGTGAAGCTG
CTGGACGACC AGGATCGCGA GGTGGCGATC GGCGAAGCGG GCGAGATCTG CGTGAAGGGA
CCGCAGGTGA TGGGCGGCTA TTGGCGCAAG CCGGACGCGA ACGCGGCCGC GTTTACCGCG
GACGGCTACT TCCGTACCGG CGACATCGGC GTGTTCGATG CGGCCGGCTT CCTGAAGATC
GTTGACCGCA AGAAGGACAT GATCATCGTG TCGGGCTTCA ACGTGTATCC GAACGAGGTG
GAAGCGGTGG CGACCGCGTT GCCGGGCGTC GCCGAATGCG CGTGCATCGG CGTGCCGGAC
GAGCGCACCG GCGAGGCCGT CAAGCTGTTC GTGGTGCCCG CGTCGGACGC GGCCTTGACC
GACGCGCAGA TCGTCGCGCA TTGCCGCGCG AACCTCGCCG CGTACAAGGT GCCGAAGCTG
ATCCGCCTGA TCGACCGGCT GCCGAAGTCG ACGGTCGGCA AGATCCTGCG CCGGGAACTC
AGTCGCGCGG AGTGA
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| Protein sequence | MTKRHWIGSY GSIPAEIDAD RHPSVTALLD DAMRRFAARP AFRAFGRTVT YADVDRLSTA
LAAYLQQVAG VRKGDRVAVM LPNVLAFPVV FVALARIGAI QVNVNPLYTA HELEHQLNDA
DVEVAVVCGG SMGTFADVVG RTRIRTVLSV GRGDLGVVDA PAGACDALPP GSIALAHALA
AGESLVVEPV ALGGDDLLLL QYTGGTTGLS KGAALSHRNL VANIAQFGAI VPDSRRPGEE
VIVTAIPLYH IFALTVNFLS YFAIGAENWL VANPRDMDGF IDVLKAARPS VFVGVNTLYA
GLVAQPRLNE VDWSRLTLSA GGGAAVIDVI SARWKAVTGN FIREGYGLSE TSPVVTFNPQ
SIDAFTGTTG LPLPSTDVKL LDDQDREVAI GEAGEICVKG PQVMGGYWRK PDANAAAFTA
DGYFRTGDIG VFDAAGFLKI VDRKKDMIIV SGFNVYPNEV EAVATALPGV AECACIGVPD
ERTGEAVKLF VVPASDAALT DAQIVAHCRA NLAAYKVPKL IRLIDRLPKS TVGKILRREL
SRAE
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