Gene Bamb_5767 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5767 
Symbol 
ID4314674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp231871 
End bp232767 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content64% 
IMG OID638153609 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_777648 
Protein GI115360511 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAACG CTTCCCCGGG GTGGATCGAT CAGCGGCTGG CCCTCGTCGG CACGGCCGAC 
GTGCCGCTGT ACGTGATCGT CAACGACGAG GCCGCGACGC TGATCGAGGG TGGCCTGAGC
GGCATGACGG AGCTCGTGTG GCAGCAGCTT CACGACCTGC TGCGGGACTT TGGCGGCATC
CGGCATTTGC GCTACTGGCT GATCACCCAC TCGCACTATG ACCATTGCAG CCTGCTGATG
ACGCTCAAGT CGCGCATGCC GTGGCTCCAT GTATCCGGTT CTCCCGACGC GTTCGATGCG
TTCCAGAGCC CGTCGGCCTG CCGAACCATC CGTCAGCTCG ACGCGCAAGC GTCACGGTCG
TGGGATCCCG CCGTCGGCGT CGATTTCACC GAGTTATCCG ATCTGCCGTT CTACCCGGTC
AATCCGGACA CGCAGCTCGA CATCGGCGAC GGGATGCAGA TTCGCACGAT CGCGCTGCCG
GGCCACAGCC GTTGCCAGTT CGGCTACTAC TGCCCGCAGC TGGACATCGG TTTCGTGTCG
GATGCGCTCG GCGAATTTCA AGGCGCCACC AGCTGGCTGC CGCTGGTCTT TCAGGACCTG
TTTGCGTATC GGCACACGCT GGACGTCATC GAGCAACTGC AGGCGCCGCG GCTCGCATTG
GGGCATCACG GCATCCTCAC CGGCGAGCTT GCCCGATCGG CCGTGCGGCA TGCACGTACG
TGCCTCGATG CGCGCGAGGC CGACGCACGC GCGGTTCGCG GCAACGCCAC CGCCACGCAC
GAACTGGCCC ACCAGTGGAC TGCGCGTTAT GCGGCAAGGA GCGAACGGGT GGTGCCGCAT
TTCCTGCATC TCAAAAGCAT GATGCACATG ATCGATCTGT TCCATCGCGC CGAATAG
 
Protein sequence
MLNASPGWID QRLALVGTAD VPLYVIVNDE AATLIEGGLS GMTELVWQQL HDLLRDFGGI 
RHLRYWLITH SHYDHCSLLM TLKSRMPWLH VSGSPDAFDA FQSPSACRTI RQLDAQASRS
WDPAVGVDFT ELSDLPFYPV NPDTQLDIGD GMQIRTIALP GHSRCQFGYY CPQLDIGFVS
DALGEFQGAT SWLPLVFQDL FAYRHTLDVI EQLQAPRLAL GHHGILTGEL ARSAVRHART
CLDAREADAR AVRGNATATH ELAHQWTARY AARSERVVPH FLHLKSMMHM IDLFHRAE