Gene Bamb_5735 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5735 
Symbol 
ID4314642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp188247 
End bp188693 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content60% 
IMG OID638153577 
Productprotein of unknown function DUF861, cupin_3 
Protein accessionYP_777616 
Protein GI115360479 
COG category[R] General function prediction only 
COG ID[COG3450] Predicted enzyme of the cupin superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.194055 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGAT ACGCCCTCGC AGCGCTGCTG TCGTTCAGCG TCATGACTGC GGTCGACGCG 
CACGCCGAAA CGATCAAGCC GGTCAAGGCG TCGAGGTCCG ACCTTGCCGG TGCGATATTC
AATCGCGCCG ATGCTGTGAA AAAAGACGAA GGCGGCGAAA CGAACGCGGA CGTCGCGACG
TTCACGTCGA CCGACAACGC TTACCAGACC GGCGTCTATC GATCCGGCCC GTCGCATGAG
GAAATCAAGG GGCCGCACGG GCTGCCGTAC AACGAGTTCC TGTACTTTCT TTCGGGCAGC
GTGAAGCTCA CGTCATCGGA CGGTTCGGTG ATGCTCGTGA AGACCGGCGA GGCCGTCACG
CTTCCGAAGG GATGGACCGG ACATTTCGAC ACGCCGGGCT ATACGAAGCT CTACGTGACC
TACAACCCCG ACGACAGGAA AAAATAG
 
Protein sequence
MSRYALAALL SFSVMTAVDA HAETIKPVKA SRSDLAGAIF NRADAVKKDE GGETNADVAT 
FTSTDNAYQT GVYRSGPSHE EIKGPHGLPY NEFLYFLSGS VKLTSSDGSV MLVKTGEAVT
LPKGWTGHFD TPGYTKLYVT YNPDDRKK