Gene Bamb_5720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5720 
Symbol 
ID4314627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp172061 
End bp173566 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content70% 
IMG OID638153562 
Producthypothetical protein 
Protein accessionYP_777601 
Protein GI115360464 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.131823 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCCA TTGCATGGTT GGTCATGTCA GCCGTTCTCG CGCTGAGCGC ATGCGGCGGC 
GACGACGTCG CCACGAACGG CGGCGCGTCG TCGTCGACGC CGGGCAATCC CGGTTCGCCG
TCCGGAACGA CACCGCCCGG CGGCGGTTCG AGCGGCGGCC CGACGGGCGG CGGCACCGCG
CAGCCGCAGG CCGGCTGGTC GACGGCCGTC GCGGTGGACG GCAAGGGACC GGAAGGCGAC
CCCAGCGTGA CGATCGACGC GAGCGGCAAT GCGCTCGCCA CGTGGATGAC CCTTGGCCCG
GCCGGCACGA ACGGCAACGA AATGTGGGGC GCGCGCTATG TCCCGGGCTC GGGCTGGGCC
AGCGCGACGC GGCTCGATAC GAGCGATGGG TCGCATTCGA TGAACGGGCT GACCGGCGTT
CAGCCGCAAC TGGTCGGCAA CGCGAGCGGG CAAGCGGTCG CGTTCTGGAC GGAATGGATG
CCGGGCCCCA ACACGTACGC ACTGTGGGCG CGCCCGTACA GCCCGGCTAC CGGATGGGGC
GTGCCGCTCG AGCTGGCGGC GGACATGGCC GGTTCGTCCT ATACGGCCGG GATCGACAGC
CAGGGCAACG CGCTCGTCGC GTGGACGCAA TCGATCAGCC TGCTCGATAC GCGCATCGCA
TGGACACGCT ATACGCAGGC GGGACAGTGG TCGCCGACGG CGCTGATCCA GATGCCGGTG
CAGACCGGGC CAGGCGCGGT GACCGGCGAT ACCGACAACG TGAGGCCGAT GCTGTCGGTG
CTGCCGTCCG GCCGCGCGGT GCTCGCGTGG CGGCAGACCA ACCATACGAA GGCGGCGCTG
TGGACGGCCA CGTACGACGC GACCAACGGC TGGACCGACG TCAACCAGGC CGTCTCGAAC
TCGAGCCTGT TCACGACGAT CATCTCTCCG GTGGCCGGCA TGGACGCGAA CGGCAACATC
ACGCTGCTCT GGGGGCAGCT CGACGTGACG GGCGGACAGA TCCTCACGGC GACGATGTCG
CAACGTTACG TGGCCGGCAC CGGGTGGCAG CCCGCGCAGC CCGTCGCGCC GGCGATCGCG
GAGCCGACCG GGTTCATCGC GACGCCGATG CTGACCGTCA ACGAAAACGG CGTGGCCGCC
GCGATGTGGG CCGAAGGCGG CGCCGTGCTG CAGGCGAGCG TATCCGATGC CAGCGGCAAC
TGGGGACCGC TGCAGCGGCT GACGGAGCAC CTGAACGGGG CGGCCGCGCA GTATCCGCCG
CTGGTGATCG ACGCGGCCGG CAACGTGACG GCCGCATGGC AGGACACGGG CTTGCCGGGC
GCGTCGGCCG TCGTTGCGGC CACCTACCGG AAAGGGGCGT GGAGCGCATC GACGGTGGCG
GCGCAGAGCG CATCGTGGCC GGCGCTCGCC GTCAACGGCA CGGGGTCGAT GGCGCTCGTC
TGGCAGTCGT ATGTCGCGAG TATCGGCAGC CAGTTGCAGT CCAGTTTCTA TACCCCCGGC
TCGTAA
 
Protein sequence
MKPIAWLVMS AVLALSACGG DDVATNGGAS SSTPGNPGSP SGTTPPGGGS SGGPTGGGTA 
QPQAGWSTAV AVDGKGPEGD PSVTIDASGN ALATWMTLGP AGTNGNEMWG ARYVPGSGWA
SATRLDTSDG SHSMNGLTGV QPQLVGNASG QAVAFWTEWM PGPNTYALWA RPYSPATGWG
VPLELAADMA GSSYTAGIDS QGNALVAWTQ SISLLDTRIA WTRYTQAGQW SPTALIQMPV
QTGPGAVTGD TDNVRPMLSV LPSGRAVLAW RQTNHTKAAL WTATYDATNG WTDVNQAVSN
SSLFTTIISP VAGMDANGNI TLLWGQLDVT GGQILTATMS QRYVAGTGWQ PAQPVAPAIA
EPTGFIATPM LTVNENGVAA AMWAEGGAVL QASVSDASGN WGPLQRLTEH LNGAAAQYPP
LVIDAAGNVT AAWQDTGLPG ASAVVAATYR KGAWSASTVA AQSASWPALA VNGTGSMALV
WQSYVASIGS QLQSSFYTPG S