Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5707 |
Symbol | |
ID | 4314614 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008392 |
Strand | - |
Start bp | 157821 |
End bp | 158609 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638153549 |
Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
Protein accession | YP_777588 |
Protein GI | 115360451 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.832582 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACGACG TTCTCTCCGA AGTCGCGACG CTGCCGCTGA CGATCAACGG CATTGCGATC GACGACGCGG CCATCGCGGC CGAAGCCGCG CATCACGGCG ATGCGCGCGA TCCGCTCGAC GCGGCACGGC ATGCGCTTGC GGTGCGCGAG CTGTTGCGTC AGCGCGCGGT GGCGCTCGCG CTGATCGACG AACGCGCGCC GCTCGACGAC GCGACGGTCG ACGCGCTGCT CGAATGCGAG CTGACGCACG TGCCTGAACC CGATCGAGCG GATTGCGAGC GCTACTACGC GCAGCATCCG GCGCGCTTTC GCCGCAACGA CATCGTTTAT GCAAGCCACG TGCTGTTCGC GGTGACCGAC CGCGTGCCGC TCGCGCCGCT GCGGCAGCGC GCGGAACGTG CGCTCGCCGA CGTGGTCGCC GCGCCCGATA CGTTCGAAGC AGTGGCGCGC GAATCGTCGA ACTGTCCGTC GGCGCAAGTC GGCGGCAGCC TCGGGCAACT GCTGCGCGGC GACACCGTGC CGGAATTCGA GGCCGCGCTG TTCGATACAG ACGGGCTCGG CGTGCTGCCG AAACTCGTCG ACACGCGCTT CGGCTTTCAC ATCGTGCGCA TCGAGCGCCG CATACCGGGC GACGTCGTGC CGTTCGACGA AGCCGCCGGC CAGATCGCCG CGTACCTGTC GGAACGCGTG CGGCAACGGG CGATGCGGCA ATACGTGGCG ATACTCGCGG CCGGCGCGCG CGTCGAAGGC GTGACCTTCG ACGGCGCGAA CGGGCCGCTC GTCCAATGA
|
Protein sequence | MNDVLSEVAT LPLTINGIAI DDAAIAAEAA HHGDARDPLD AARHALAVRE LLRQRAVALA LIDERAPLDD ATVDALLECE LTHVPEPDRA DCERYYAQHP ARFRRNDIVY ASHVLFAVTD RVPLAPLRQR AERALADVVA APDTFEAVAR ESSNCPSAQV GGSLGQLLRG DTVPEFEAAL FDTDGLGVLP KLVDTRFGFH IVRIERRIPG DVVPFDEAAG QIAAYLSERV RQRAMRQYVA ILAAGARVEG VTFDGANGPL VQ
|
| |