Gene Bamb_5632 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5632 
Symbol 
ID4314499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp65668 
End bp66807 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content68% 
IMG OID638153474 
Productnatural resistance-associated macrophage protein 
Protein accessionYP_777513 
Protein GI115360376 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1914] Mn2+ and Fe2+ transporters of the NRAMP family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0218907 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0416816 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTGGA TGACCATCGT CGCGCTGCCG ATGATGGTGG CCGTGCAGCT CGCGTCGGCG 
TTCATCGGAC GCACCAATCG CGAAGGCCTC GTCGCGGGCA TCCGCAAGCA GTTCTCCGAC
CGGCTCGCCA AAGGGCTGAT CGTGATGATC GTGATCGTCA ACGTGATCAA CGTCGGCGCT
GATCTCGCCG CGATGGGCGA CGCGACCGCG CTCGTCGCCG GCGGGCGCAG CTACTGGTAT
GCGCCCGTCT ACGGCCTCGG GTCGCTCGCG CTGCAGGTGC TGCTGTCCTA CGAGCGCTAC
GCGCGCTGGC TGAAATGGAT GACGCTCGGC CTGCTCGCGT ACGTGCTCGA ACTCGGCTTC
GTGCACATCG AATGGCGCAA CCTGCTGCAC GCGCTCGTGC TGCCGCATGT CGCGTTCACG
CACGAATACG CGACGACCGC GGTCGCGGTG CTCGGCACGA CGCTGAGCCC GTACCTGTTC
GTGTGGCAGG CCGCGCTCGA AGTGGAGGAA ACCCAGGCCG AGCGCCGCAA CGGCGACACC
GCGTGCGCGC CCGGCGCGCG CCGCGAAACC GAACGGCGCA TCACGTTCGA TACCTGGACC
GGGATGATCG TGACCAACGC GGTGTCGTTC TGCATCATGG TGATCGGCGC GGCGGTGTTC
TTCACACACG GCAAGCACGA CATCGGCTCC ACCGCGCAGG CCGCCGAGGC GCTGCGCCCG
ATCGCCGGCG AAGCGGCGTT CCTCGTGTTC GCGTTCGGCA TCGTCGGCTG CGGGCTGCTC
GCGATCCCCG CATTCGCGGG CAGCGCCGCG TACGGCTGCG CGGAGGCCTG GCGGTTCCGC
GAAGGCCTGA ACGAGCCGGT GCGGCGCGCG CCCGCGTTCT ACTCGGTGCT GGCGGCTTGC
GTGCTCGTCG GCATCGCGAT CTGTTTCAGT CCGGTCAATC CGATCAAGGC GCTGTACTGG
AGCGCGGTGC TCAACGGCAT CGCGGCGGTG CCGATGCTCG TGCTGGTGAT GCTGCTGTCG
CAGCGGCGCG ACGCGGCCGG GCAGCCGGGC AGCGGGATCG TGTCGAAACT GTTCGGATGG
CTCGCAGTCA CGCTGATGGT GGCGTCGGTG GTCCTGATGA CCGTGGACAT GCTGAGCTGA
 
Protein sequence
MLWMTIVALP MMVAVQLASA FIGRTNREGL VAGIRKQFSD RLAKGLIVMI VIVNVINVGA 
DLAAMGDATA LVAGGRSYWY APVYGLGSLA LQVLLSYERY ARWLKWMTLG LLAYVLELGF
VHIEWRNLLH ALVLPHVAFT HEYATTAVAV LGTTLSPYLF VWQAALEVEE TQAERRNGDT
ACAPGARRET ERRITFDTWT GMIVTNAVSF CIMVIGAAVF FTHGKHDIGS TAQAAEALRP
IAGEAAFLVF AFGIVGCGLL AIPAFAGSAA YGCAEAWRFR EGLNEPVRRA PAFYSVLAAC
VLVGIAICFS PVNPIKALYW SAVLNGIAAV PMLVLVMLLS QRRDAAGQPG SGIVSKLFGW
LAVTLMVASV VLMTVDMLS