| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5593 |
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| Symbol | |
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| ID | 4314530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 25875 |
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| End bp | 27989 |
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| Gene Length | 2115 bp |
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| Protein Length | 704 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638153435 |
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| Product | glycogen debranching enzyme GlgX |
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| Protein accession | YP_777474 |
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| Protein GI | 115360337 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGACCG CCCTGCCTTC CCGTCTCGAA CCCGGCCGCT GCTATCCGCT CGGCGCCACG
TGGGACGGCC TTGGCACCAA CTTCGCGGTA TTTTCCGCGC ACGCGCACCG TATCCAGCTG
TGCGTGTTCG ACCCGACCGG CCGCAAGGAG CTCGCGCGCC TCGACCTGCC CGAATGCACC
GACGAGGTGT GGCACGGCTA CCTGCCGAAC GCGCATCCGG GCACCGTATA CGGCTTTCGC
GCGGATGGTC CGTACCAGCC GCAGCACGGC CATCGCTTCA ACCCGACCAA GCTGTTGCTC
GACCCGTACG CGCGCAAGCT GGTCGGCCAG TTCCGCTGGT CCGACGCGCT GTTCGGCTAT
CGCGTGCATT CGAATCGCGC GGACCTGTCG ATGGACCGCC GCGACTCGGC GCCCGCGATG
CCGAAGGCCG TGGTCGTCGA CGAGGCGTTC GACTGGCGCA ACGACCGGCG CCCGGACGTG
CCGTGGCGCA GCACCGTGAT CTACGAGACG CACGTGCGCG GCGCGTCGAT GCGCCGCGCC
GGGCTGCGCG TGCCGGAGCG TGGCACGTTC GCGTCGCTGT CGCATCCGGC GTTCATCGAT
CATCTGCTGT CGATCGGCGT GACGACGATC GAATTGCTGC CGGTGCACGC GTTCCTGCAG
CAGCGGGCGC TGGTGAACCG CGGGCTGCGC AATTACTGGG GCTACGACAC GGCCGCGTTC
TTCGCGCCGG AGCCGTCGTA CCTGACGACG CGGCGGCTTG ACGAAATGCG CATCGCGATC
CGCCAGCTGC ACGCGGCCGG CATCGAGGTC GTGCTCGACG TCGTCTACAA CCACACGTGT
GAAGGCAACG AGCTCGGCCC GACGCTGTCG TGGCGCGGCC TCGACAACGC GAGCTACTAC
CGGCTGCGGC AGGACGACCG GCGTTACCAC GTCGACGAGA CCGGCTGCGG CAACACGCTG
AACCTGTCGC ATCCGCGCGT CGTGCAGATG GTGATGGATT CGCTGCGCTA CTGGGCCACC
GCGTTCAACA TCGACGGCTT TCGGTTCGAT CTCGGCGTGA CGCTCGGCCG CGAGGATCAC
GGCTTCGAGC CGGGCGCGGG GTTTTTCGAC GCGTTGCGGC AGGATCCGGT GCTCGCGCAG
CGCAAGCTGA TCACCGAACC GTGGGATCTC GGCCTCGGCG GCTATCAGCT GGGCCGTCAT
CCGCCCGGCT TCGCCGAATG GAACGACCGC TTTCGCGACA CGGTGCGGCG GTTCTGGCGC
GGCGATGCGG GCCAGCGTCC GGAGCTCGCC GCGCGGCTCG CGGGCTCGGC CGACCTGTTC
AACCATCAAA GGCGCCGAAC CTGGGCGTCG GTCAATTTCG TGACCGCGCA CGACGGCTTC
ACGCTCGCCG ATCTGGTGTC GTATGCGCAC AAGCACAACG AGGCCAACGG CGAGGACGAC
CGCGACGGCC GCGACGACAA CTGCAGCGCG AACTGGGGCG TCGAAGGCGC CACCGACGAT
GCGTCGATTC TCGACCTGCG CGCGCGCGTC GCGCGCTCGA TGCTCGCGAC GCTGTTTACC
GCGCTCGGCA CGCCGATGAT CGTCGCCGGC GACGAATTCG GCCGGACGCA GCACGGCAAC
AACAACGCGT ATTGCCAGGA TAACGAAATA TCGTGGCTCG ACTGGGACCT CGCGCACAGC
GAGGAAGGCG TCCAGATGAT CCGTTTCGTG TCGCGGCTCG CCGCGCTGCG GCGCATGTAC
CCGGTGATGT CGGCGCCGCG CTATCCGTCC GGCGACCGCG ACGGCGCGCC GGGCATGCGC
GAGATCGGCT GGTTCGACGA ACACGGGCTC GAACTGAGCG TGCCCGCGTG GGAGGACGGC
GAAGGCCGCG CGCTGACGAT GCGGCGCGTC GGCACCGGCC GCACCGGGCG CACCGAGGCG
TTGCTCGTGA TCCTGAACGC ATCGGCCGGC ACCATCAAGT TCAAGCCGCC CGCACCGGTG
CTCGACTATC GCGTGCTGCT CGACACCGCG ACGCCCGACT CCGGCCCGCG CTCGTGGCCG
GAGGCCGGCC TCGAGGTCGC CGCGCACACG GCCGTGATCG CGGTCGCGGC CGTGCCACCC
GACCTGCCCT CGTGA
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| Protein sequence | MPTALPSRLE PGRCYPLGAT WDGLGTNFAV FSAHAHRIQL CVFDPTGRKE LARLDLPECT
DEVWHGYLPN AHPGTVYGFR ADGPYQPQHG HRFNPTKLLL DPYARKLVGQ FRWSDALFGY
RVHSNRADLS MDRRDSAPAM PKAVVVDEAF DWRNDRRPDV PWRSTVIYET HVRGASMRRA
GLRVPERGTF ASLSHPAFID HLLSIGVTTI ELLPVHAFLQ QRALVNRGLR NYWGYDTAAF
FAPEPSYLTT RRLDEMRIAI RQLHAAGIEV VLDVVYNHTC EGNELGPTLS WRGLDNASYY
RLRQDDRRYH VDETGCGNTL NLSHPRVVQM VMDSLRYWAT AFNIDGFRFD LGVTLGREDH
GFEPGAGFFD ALRQDPVLAQ RKLITEPWDL GLGGYQLGRH PPGFAEWNDR FRDTVRRFWR
GDAGQRPELA ARLAGSADLF NHQRRRTWAS VNFVTAHDGF TLADLVSYAH KHNEANGEDD
RDGRDDNCSA NWGVEGATDD ASILDLRARV ARSMLATLFT ALGTPMIVAG DEFGRTQHGN
NNAYCQDNEI SWLDWDLAHS EEGVQMIRFV SRLAALRRMY PVMSAPRYPS GDRDGAPGMR
EIGWFDEHGL ELSVPAWEDG EGRALTMRRV GTGRTGRTEA LLVILNASAG TIKFKPPAPV
LDYRVLLDTA TPDSGPRSWP EAGLEVAAHT AVIAVAAVPP DLPS
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