| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5576 |
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| Symbol | |
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| ID | 4314536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 1855 |
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| End bp | 2511 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638153418 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_777457 |
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| Protein GI | 115360320 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
[TIGR03003] ectoine/hydroxyectoine ABC transporter, permease protein EhuD |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.088801 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCTTCC AGAACGCCGT TGAATTCCTG CCGATCCTGC TGAAAGGCGC GGTCGTCACG
ATCGAGATCA CTTTCTGCTC GTTCGTCCTG AGCACCGTGC TCGGGTTGCT GCTCGCGCTG
ATGCGCGTGT CCGACAACCG CGTCCTGTCG AACACGGCCG CAACTTTCAT CAACGTGATT
CGCGGACTGC CGATCATCGT TCAGCTCTTC TATATCTACT TTGTGCTGCC CGATCTCGGT
GTGCAGTTGT CCGCCTTCCA GGCCGGGTTT ATCGGCCTCG GTATTGCGTA CTCGGTGTAT
CAGGCGGAGA ACTTTCGCGC GGGCATTCAG GCGATCGATC ACGGGCAGAT CGAAGCGGCG
CAGTCCATTG GCATGCGCGG CACGATGATC ATGCGGCGCG TGGTGCTGCC GCAAGCGTTC
CGGATCGCGC TGCCACCGTA CGGCAACACG CTCGTGATGA TGCTCAAGGA TTCGTCGCTC
GCCTCGACGA TCACGGTCGC CGAAATGACG CGTGCCGGGC AGCTCATCGC ATCGTCCACG
TTTCAGAACA TGACGGTTTT CACGCTGGTC GCGCTGCTAT ATCTCGGACT CAGCCTGCCG
CTCGTCTATG GATTGCGGCG GCTCGAACGC CGCCTTGGAC TGAAGGGAAA ACGATGA
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| Protein sequence | MFFQNAVEFL PILLKGAVVT IEITFCSFVL STVLGLLLAL MRVSDNRVLS NTAATFINVI
RGLPIIVQLF YIYFVLPDLG VQLSAFQAGF IGLGIAYSVY QAENFRAGIQ AIDHGQIEAA
QSIGMRGTMI MRRVVLPQAF RIALPPYGNT LVMMLKDSSL ASTITVAEMT RAGQLIASST
FQNMTVFTLV ALLYLGLSLP LVYGLRRLER RLGLKGKR
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