Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5563 |
Symbol | |
ID | 4314452 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 2636650 |
End bp | 2638122 |
Gene Length | 1473 bp |
Protein Length | 490 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638153405 |
Product | sigma-54 dependent trancsriptional regulator |
Protein accession | YP_777444 |
Protein GI | 115360306 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTGCAA GGTCACCCGA CGCAAACGGG ACGGCGGCGC CCGAGATGCC GCTCGTATCC GTTACCGCCC CCGAGGCCGG ACGCAAGCTG TTCGTGATCA TGCGTTCGCC GGACGAGCCG TTGCTGGCGC AACTGCGCGG GCTCGGCTGG GATATCTCGA TCGCCAAGAC AGCCGGCGCC GCGCAGAACA TGACATCCGG CGTCAACGTC GCCGCCGGGC TCATCGATTT CTCCGGATTC ACGTCGCGCG ACTATCCCGC GCTGAAGGCG TGCCTGAGTC AGGCGGCGAT CGGCTGGATT TCCGTCGCGC AGGCCGGTGT CACGATCAGC CCCGCCGTGC GCGAAATGAT CCGCAGCTAC TGTTTCGATT ACGTGACGCT GCCGTTGCCG CACGAATGGA TTTCGCACGT GCTCGGCCAT GCACGCGGGA TGGCCGCGCT CGATCGCGTC GACGGCGCGG CCTACGCGGC GTCGATCGGC GAGCACGGGA TGATCGGCAA CTGCGAAGCG ATGCAACAGT TGTTCAGCAC GATTCGCAAG GTCGCGAAAA CCGACGCGAG CGTGTTCATC TCCGGCGAGT CGGGCACCGG CAAGGAGCTG ACGGCGCTCG CGATCCACGA GCGCTCGGTG CGCGGCAAGG GCCCGTTCGT CGCGATCAAC TGCGGCGCGA TTCCGCATCA CCTGCTGCAG TCGGAACTGT TCGGCTACGA GCGCGGCGCA TTCACCGGGG CGAACCAGCG GCGCGCGGGC CGGATCGAAT CCGCGAACGG CGGCACGCTG TTTCTCGACG AAATCGGCGA CATGCCGGTC GAAAGCCAGG CGAGCCTGCT GCGCTTCCTG CAGGAAGGGA AGATCGAGCG GCTCGGCGGC CAGGAATCGA TTTCGGTCGA TGTGCGGATC ATCTCGGCGA CGCACGTGGA TCTCGACGGC GCGGTCGAAG CCGCACGCTT TCGCGCGGAC CTCTATCACC GGCTCTGCGT GCTGCGCATT CACGAGCCGC CGCTGCGCGC GCGCGGCAAG GACATCGACA TCCTCGCGCA TTACGTGCTG CAGAAATACA AGGCCGACAG CGGCCGCAAG ATCAGCGGCT TCACGTCGGC CGCGCTCGAC GCGATGCGCC GCTACGAGTG GCCCGGCAAC GTGCGCGAGC TGATCAACCG GGTGCGCCGC GCGATCGTGA TGGCGGAAAG CCGGCTGCTC ACGCCGAACG ATCTCGGGCT CGAGACGCCG GGCGAAACGG AGCCCGTGAC GCTCGAACAG GCGCGTTCGC TCGCCGAGCG CACCGCGATC GAGAACGCGC TGCTGCGCAA CGATCACCGG ATCAACAAGG CCGCCGCCGA ACTCGGCATC TCGCGCGTGA CGCTCTACCG GATGATGATC GAGCACGGGC TCAACGACCA CGACAACAAC GGCGACAACG GCGGGAAGGA CGGTTCACCG TCCGGCGACG CTGACCACCA GCGCGTCGGC TGA
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Protein sequence | MVARSPDANG TAAPEMPLVS VTAPEAGRKL FVIMRSPDEP LLAQLRGLGW DISIAKTAGA AQNMTSGVNV AAGLIDFSGF TSRDYPALKA CLSQAAIGWI SVAQAGVTIS PAVREMIRSY CFDYVTLPLP HEWISHVLGH ARGMAALDRV DGAAYAASIG EHGMIGNCEA MQQLFSTIRK VAKTDASVFI SGESGTGKEL TALAIHERSV RGKGPFVAIN CGAIPHHLLQ SELFGYERGA FTGANQRRAG RIESANGGTL FLDEIGDMPV ESQASLLRFL QEGKIERLGG QESISVDVRI ISATHVDLDG AVEAARFRAD LYHRLCVLRI HEPPLRARGK DIDILAHYVL QKYKADSGRK ISGFTSAALD AMRRYEWPGN VRELINRVRR AIVMAESRLL TPNDLGLETP GETEPVTLEQ ARSLAERTAI ENALLRNDHR INKAAAELGI SRVTLYRMMI EHGLNDHDNN GDNGGKDGSP SGDADHQRVG
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