Gene Bamb_5531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5531 
Symbol 
ID4314420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2602585 
End bp2603601 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content71% 
IMG OID638153373 
Productalcohol dehydrogenase 
Protein accessionYP_777412 
Protein GI115360274 
COG category[R] General function prediction only 
COG ID[COG2130] Putative NADP-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGACAC CCGTGAACCG CCAGCTGCTG CTGAAAACGC GCCCGGAAGG GCGGGTCGGC 
CGCGAACACT TTTCGCTCGT CGAAACCCCC GTGCCGGCGC TCGCCGACGG CGAAGTGCTC
GTGCGCGTGC TGTATCTGTC GATGGATCCG ACCAACCGCG TATGGATGAG CGACGTGCCG
CAATACCTGC CGCCCGTCGC GATCGGCGAG GTGATGCGCG CGCTCGGCAT CGGGCGCGTG
GTCGCGTCGC GCCACGCGGG TTTCGCGGAA GGCGACCTCG TGCAGGGGCT CGTCGGCTGG
CAGGACTATG CGGTCGTCGC GGCCGACCAG GCCGCGCAGC TCGTGAAGCT GCCCGCGCAG
TCGGGCCTGC CGCTGCCGAC GCTGCTCGGC GCGTGCGGGA TGAGCGGCCT GACCGCGTAC
TACGGGCTGA CCGACATCGC GCCGGTGCAG CCCGGCGAGA CGCTCGTCGT GTCGGCGGCG
GCCGGCTCGG TCGGCTCGAT CGCCGGCCAG ATCGGCAAGA TCCACGGCGC GCGGGTGGTC
GGCATCGCGG GCGGCGCGGA CAAGTGCCGC TACCTGACCG AGACGCTCGG CTTCGACGCG
GCCGTCGACT ACAAGGCCGA CGATTTCCGT GAGCAGCTGA AGGCGGCGAC GCCGGACGGC
GTGCACGTGA ACTTCGAGAA CGTCGGCGGC GAAGTGATGC GCGCGGTGCT GTCGCGGATG
GTGATCGGCG GGCGCGTCGC ACTGTGCGGC GTGATCTCGA ACTACAACAG CGGCCGCGCG
GCGGACGACG TCGGCGTGCT GATCTCGAAG CGCATCACGA TGCGCGGCTT CCTGATCCTC
GACTACCGCA AGAGCCGCGA AGCGGTGCAG ACGCTCGCCG GCTGGCTGCG CGACGGCCGT
CTCAAGGCCG AGGAAACCGT GGCCGACGGG CTCGAAAACG CCCCCGACGT GCTCAATCGC
CTGTTCGACG GCGACCATCG CGGCAAGCTC GTGCTGCGCG TCGATCCGGG CGCGTGA
 
Protein sequence
MSTPVNRQLL LKTRPEGRVG REHFSLVETP VPALADGEVL VRVLYLSMDP TNRVWMSDVP 
QYLPPVAIGE VMRALGIGRV VASRHAGFAE GDLVQGLVGW QDYAVVAADQ AAQLVKLPAQ
SGLPLPTLLG ACGMSGLTAY YGLTDIAPVQ PGETLVVSAA AGSVGSIAGQ IGKIHGARVV
GIAGGADKCR YLTETLGFDA AVDYKADDFR EQLKAATPDG VHVNFENVGG EVMRAVLSRM
VIGGRVALCG VISNYNSGRA ADDVGVLISK RITMRGFLIL DYRKSREAVQ TLAGWLRDGR
LKAEETVADG LENAPDVLNR LFDGDHRGKL VLRVDPGA