Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5531 |
Symbol | |
ID | 4314420 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 2602585 |
End bp | 2603601 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638153373 |
Product | alcohol dehydrogenase |
Protein accession | YP_777412 |
Protein GI | 115360274 |
COG category | [R] General function prediction only |
COG ID | [COG2130] Putative NADP-dependent oxidoreductases |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTCGACAC CCGTGAACCG CCAGCTGCTG CTGAAAACGC GCCCGGAAGG GCGGGTCGGC CGCGAACACT TTTCGCTCGT CGAAACCCCC GTGCCGGCGC TCGCCGACGG CGAAGTGCTC GTGCGCGTGC TGTATCTGTC GATGGATCCG ACCAACCGCG TATGGATGAG CGACGTGCCG CAATACCTGC CGCCCGTCGC GATCGGCGAG GTGATGCGCG CGCTCGGCAT CGGGCGCGTG GTCGCGTCGC GCCACGCGGG TTTCGCGGAA GGCGACCTCG TGCAGGGGCT CGTCGGCTGG CAGGACTATG CGGTCGTCGC GGCCGACCAG GCCGCGCAGC TCGTGAAGCT GCCCGCGCAG TCGGGCCTGC CGCTGCCGAC GCTGCTCGGC GCGTGCGGGA TGAGCGGCCT GACCGCGTAC TACGGGCTGA CCGACATCGC GCCGGTGCAG CCCGGCGAGA CGCTCGTCGT GTCGGCGGCG GCCGGCTCGG TCGGCTCGAT CGCCGGCCAG ATCGGCAAGA TCCACGGCGC GCGGGTGGTC GGCATCGCGG GCGGCGCGGA CAAGTGCCGC TACCTGACCG AGACGCTCGG CTTCGACGCG GCCGTCGACT ACAAGGCCGA CGATTTCCGT GAGCAGCTGA AGGCGGCGAC GCCGGACGGC GTGCACGTGA ACTTCGAGAA CGTCGGCGGC GAAGTGATGC GCGCGGTGCT GTCGCGGATG GTGATCGGCG GGCGCGTCGC ACTGTGCGGC GTGATCTCGA ACTACAACAG CGGCCGCGCG GCGGACGACG TCGGCGTGCT GATCTCGAAG CGCATCACGA TGCGCGGCTT CCTGATCCTC GACTACCGCA AGAGCCGCGA AGCGGTGCAG ACGCTCGCCG GCTGGCTGCG CGACGGCCGT CTCAAGGCCG AGGAAACCGT GGCCGACGGG CTCGAAAACG CCCCCGACGT GCTCAATCGC CTGTTCGACG GCGACCATCG CGGCAAGCTC GTGCTGCGCG TCGATCCGGG CGCGTGA
|
Protein sequence | MSTPVNRQLL LKTRPEGRVG REHFSLVETP VPALADGEVL VRVLYLSMDP TNRVWMSDVP QYLPPVAIGE VMRALGIGRV VASRHAGFAE GDLVQGLVGW QDYAVVAADQ AAQLVKLPAQ SGLPLPTLLG ACGMSGLTAY YGLTDIAPVQ PGETLVVSAA AGSVGSIAGQ IGKIHGARVV GIAGGADKCR YLTETLGFDA AVDYKADDFR EQLKAATPDG VHVNFENVGG EVMRAVLSRM VIGGRVALCG VISNYNSGRA ADDVGVLISK RITMRGFLIL DYRKSREAVQ TLAGWLRDGR LKAEETVADG LENAPDVLNR LFDGDHRGKL VLRVDPGA
|
| |