| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5530 |
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| Symbol | |
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| ID | 4314419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 2601761 |
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| End bp | 2602549 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638153372 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_777411 |
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| Protein GI | 115360273 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGTCG TTTCCTCGCG CCTCGCAGGC AAGTGCGCGT ACATCACGGG CGCCGCCGGC
GGCCTCGGAC GCGCGATCGC GCGCCGCATG GTCGAGCAGG GCGCGCGCGT GTTCCTGACC
GACATCGCCG ACGCGGCCGT GCTCGACGCC TTCGCGCACG AACTCAATGC AGGGCACGCG
GCGCCTGTCG CGTTCGCGGC CACGCAGGAC GTGCGCGACG AGGGACACTG GCAGGCGCTG
CTCGCGCAGG CGAACGAAGC GATGGGCGGC TTGTCGGTGC TCGTCAACAA TGCGGGCGTC
GGGTCGATCG GCACGCCTGC GCAGATCGAG ATCGACGAGT GGCGGCGCGT GATGGCGATC
AACGTCGAGA GCATCGTGCT CGGCTGCAAG CATGCGCTGC CGTACCTCGG CGCGAGCCGG
CCGGCGTCGA TCATCAACAT CTCGTCGGTG GCCGCGTTCA AGGTCGAGCC GGAATTCACC
GCGTACAACG CGTCGAAGGC CGCGGTCGCG TCGCTGACGA AGTCGGTCGC GATCGATTGC
GCGCGCCGCG AGCTCGACGT GCGCTGCAAC TCGATTCACC CGGCGTTCAT TCGCACGGGG
ATCGTCGAGC CGCTGTTCCA GTCGCTCGGC GAACGCGATG CGACGCGCAA GCTCGCGCGC
GGCATTCCGT TGCGCCGGCT CGGCGATCCG GATGACGTCG CGCATGCGGC CGTCTATCTG
GCGTCGGACG AAAGCCGCTT CGTGACGGCC GCCGAACTCG TGATCGACGG CGGCATGTGC
GCGGTCTGA
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| Protein sequence | MTVVSSRLAG KCAYITGAAG GLGRAIARRM VEQGARVFLT DIADAAVLDA FAHELNAGHA
APVAFAATQD VRDEGHWQAL LAQANEAMGG LSVLVNNAGV GSIGTPAQIE IDEWRRVMAI
NVESIVLGCK HALPYLGASR PASIINISSV AAFKVEPEFT AYNASKAAVA SLTKSVAIDC
ARRELDVRCN SIHPAFIRTG IVEPLFQSLG ERDATRKLAR GIPLRRLGDP DDVAHAAVYL
ASDESRFVTA AELVIDGGMC AV
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