Gene Bamb_5473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5473 
Symbol 
ID4314362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2536020 
End bp2537237 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content64% 
IMG OID638153315 
ProductUDP-N-acetylglucosamine 2-epimerase 
Protein accessionYP_777354 
Protein GI115360216 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0381] UDP-N-acetylglucosamine 2-epimerase 
TIGRFAM ID[TIGR00236] UDP-N-acetylglucosamine 2-epimerase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGA TCTTGCTTGT GTTCGGGACT CGGCCGGAAG CCATCAAGAT GGCGCCGCTC 
GTGCGCGCAC TCAAGGCGCG CAGGGATGTC GACGCCCGGG TATGCGTCAC CGCCCAGCAT
CGGGAAATGC TGGATCAGGT CCTCACGTTG TTCGGCATCA AGCCCGACTA CGATCTCAAT
CTGATGCGTC AGAGCCAGAC GCTGACCGAC GTGACGACCG GCATTCTGCA GGCGATCGGC
GTCGTTTTCG AGGACTTCCA TCCGGACGTC GTCCTGGTGC ACGGCGATAC GACGACGACG
CTGGCCGTGA GTCTCGCCGC GTTCTATCGC TACCTGCCGG TCGGTCACGT GGAAGCCGGT
CTGCGCAGCG GCGACATCTG GTCGCCATGG CCCGAGGAAC TGAATCGCCG CGTGACCGAC
GCTGTGTCGT CATGGCATTT CGCGCCAACC GGCCAGGCGC GCGACAACCT GTTCAGCGAA
GGCATCCCGG TGGGCGCGGT CGTGATGACC GGCAACACCG TGATCGACGC GCTGCACGAC
GTCAAACGGA TGCTCGATCA CAATGCCGAG CTCAACGATA CCGTCGCCGC GCACTTTCCG
TTTCTCGAGC CGTCGCGTCG CGTCGTGCTG ATCACCGGCC ATCGCCGCGA GAGCTTCGGC
GAGCCGTTCC GGCATTTCTG CAACGCGCTC GGCGCGCTCG CGAACCGCTA TCGCGATGCG
CAGTTCGTCT ATCCGCTGCA CATGAATCCG AACGTGCGGG AGCCGGCGCG CGCGCTACTC
GGCGACGTGC CGAACATTTA CCTGATCGAT CCGCAGGAAT ATCTTTCGTT CGTATTCCTG
ATGTCACGCG CGCATTTCAT CATCACGGAT TCTGGCGGCA TCCAGGAGGA AGGGCCGGCG
CTCGGCAAAC CGGTGCTCGT CACGCGCGAG ACGACCGAGC GCCCCGAAGC GATCCAGGCC
GGCACCGCAC GGCTCGTCGG CACGGATCAG GAACGGATCA TCTGGGAAGC GTCACGGCTG
TTCGACAGCG AGAGCGCGTA TGAGGAAATG GCGCGCGCGA GCAATCCGTA TGGCGACGGC
CATGCGAGCG AGCGGATCGT TCACGCGCTG ATGCATATGC CGGGAGCGAG CGCGAACGCG
ACGAGCTTTT CGATGGGCGC CGCGGAGATG CCGTTCAACG CGCTCGCGCT GGGGTTGCAG
GCGTTGCGCT CGCCTTGA
 
Protein sequence
MKKILLVFGT RPEAIKMAPL VRALKARRDV DARVCVTAQH REMLDQVLTL FGIKPDYDLN 
LMRQSQTLTD VTTGILQAIG VVFEDFHPDV VLVHGDTTTT LAVSLAAFYR YLPVGHVEAG
LRSGDIWSPW PEELNRRVTD AVSSWHFAPT GQARDNLFSE GIPVGAVVMT GNTVIDALHD
VKRMLDHNAE LNDTVAAHFP FLEPSRRVVL ITGHRRESFG EPFRHFCNAL GALANRYRDA
QFVYPLHMNP NVREPARALL GDVPNIYLID PQEYLSFVFL MSRAHFIITD SGGIQEEGPA
LGKPVLVTRE TTERPEAIQA GTARLVGTDQ ERIIWEASRL FDSESAYEEM ARASNPYGDG
HASERIVHAL MHMPGASANA TSFSMGAAEM PFNALALGLQ ALRSP