Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5464 |
Symbol | |
ID | 4314353 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 2527279 |
End bp | 2527968 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638153306 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_777345 |
Protein GI | 115360207 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4215] ABC-type arginine transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTTTCC AGGGATTTGG CCCGCTGCTG TGGGCCGGCA CGGTGGAAAC CGTGAAGCTG GCGGTGCTGT CGCTCGCCGC GTCGCTCGTG CTGGGGCTGG TCGGTGCGAG CGCGAAACTG TCGACGAACC GCGCGCTCAA GGCGCTCGGC ACGTTCTATA CGACACTGAT TCGCGCGGTG CCCGATCTCG TGCTGATGCT GCTGCTGTTT TACGGGATCC AGATCCTGCT GAACATGGCG ACCGACGCGC TCGGCTGGGA TCAGATCGAC ATCGATCCAT TCGTCGCCGG GGTCATCACG CTCGGCTTCA TCTACGGCGC GTACTTCACC GAGACGTTCC GCGGTGCGTT CCTCGCGGTG CCGCGCGGCC AGCTCGAAGC GGGCTTCGCG TACGGGATGA GCGGCTGGCG CGTGTTCCAC CGGATCCTGT TCCCGCAGAT GATGCGCTTC GCGCTGCCGG GCATCGGCAA CAACTGGCAG GTGCTCGTGA AGGCCACCGC GCTGGTGTCG ATCATCGGCC TCGCCGATGT CGTGAAGGCG TCGCAGGACG CCGGCAAGAG CACGCTCGAT TTCTTCTTCT TCACGCTCGC GGCGGGCGCG ATCTACCTCG CGATCACGAC GGTGTCGAAC GTCGTGCTGC ACCATCTCGA GAAGCGTTAT TCCGTCGGCG TCCGGAGGCT CGCACTGTGA
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Protein sequence | MIFQGFGPLL WAGTVETVKL AVLSLAASLV LGLVGASAKL STNRALKALG TFYTTLIRAV PDLVLMLLLF YGIQILLNMA TDALGWDQID IDPFVAGVIT LGFIYGAYFT ETFRGAFLAV PRGQLEAGFA YGMSGWRVFH RILFPQMMRF ALPGIGNNWQ VLVKATALVS IIGLADVVKA SQDAGKSTLD FFFFTLAAGA IYLAITTVSN VVLHHLEKRY SVGVRRLAL
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