Gene Bamb_5464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5464 
Symbol 
ID4314353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2527279 
End bp2527968 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content65% 
IMG OID638153306 
Productpolar amino acid ABC transporter, inner membrane subunit 
Protein accessionYP_777345 
Protein GI115360207 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4215] ABC-type arginine transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTTCC AGGGATTTGG CCCGCTGCTG TGGGCCGGCA CGGTGGAAAC CGTGAAGCTG 
GCGGTGCTGT CGCTCGCCGC GTCGCTCGTG CTGGGGCTGG TCGGTGCGAG CGCGAAACTG
TCGACGAACC GCGCGCTCAA GGCGCTCGGC ACGTTCTATA CGACACTGAT TCGCGCGGTG
CCCGATCTCG TGCTGATGCT GCTGCTGTTT TACGGGATCC AGATCCTGCT GAACATGGCG
ACCGACGCGC TCGGCTGGGA TCAGATCGAC ATCGATCCAT TCGTCGCCGG GGTCATCACG
CTCGGCTTCA TCTACGGCGC GTACTTCACC GAGACGTTCC GCGGTGCGTT CCTCGCGGTG
CCGCGCGGCC AGCTCGAAGC GGGCTTCGCG TACGGGATGA GCGGCTGGCG CGTGTTCCAC
CGGATCCTGT TCCCGCAGAT GATGCGCTTC GCGCTGCCGG GCATCGGCAA CAACTGGCAG
GTGCTCGTGA AGGCCACCGC GCTGGTGTCG ATCATCGGCC TCGCCGATGT CGTGAAGGCG
TCGCAGGACG CCGGCAAGAG CACGCTCGAT TTCTTCTTCT TCACGCTCGC GGCGGGCGCG
ATCTACCTCG CGATCACGAC GGTGTCGAAC GTCGTGCTGC ACCATCTCGA GAAGCGTTAT
TCCGTCGGCG TCCGGAGGCT CGCACTGTGA
 
Protein sequence
MIFQGFGPLL WAGTVETVKL AVLSLAASLV LGLVGASAKL STNRALKALG TFYTTLIRAV 
PDLVLMLLLF YGIQILLNMA TDALGWDQID IDPFVAGVIT LGFIYGAYFT ETFRGAFLAV
PRGQLEAGFA YGMSGWRVFH RILFPQMMRF ALPGIGNNWQ VLVKATALVS IIGLADVVKA
SQDAGKSTLD FFFFTLAAGA IYLAITTVSN VVLHHLEKRY SVGVRRLAL