| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5437 |
|---|
| Symbol | |
|---|
| ID | 4314326 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | - |
|---|
| Start bp | 2485701 |
|---|
| End bp | 2486972 |
|---|
| Gene Length | 1272 bp |
|---|
| Protein Length | 423 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638153279 |
|---|
| Product | HipA domain-containing protein |
|---|
| Protein accession | YP_777318 |
|---|
| Protein GI | 115360180 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACCA TCTCCGTCTA TGCGGACTGG AGCGGTCTGC CCACTCCGCT GAAGCTCGGC
CTTCTGCACG GTCGACAGAC ACGTGCCAGC GAACGGTTCG AATTCCGGTA CGACGCGGCT
GCGCTGGCTT CTCCGGAGCT TGCCGGCGTG CAGCTCGACC CCGGAATCGG CCTCTTCGAA
GGGCCGCAAT ACCCACTTCC GCCACGGAAC GCGTTCGGCG CGTTCGCCGA TTCGAGCCCC
GATCGGTGGG GCCGCATGCT GATGGATCGC CGGCTGGAGC GCGACATTCG TGCGGGCATT
CGACCGAAGG GCACGCGACT CCATGAGTCG GACTACCTGC TCGGCGTCCA TGATCTCTAT
CGGGTCGGTG CACTGCGCTA CAAGCTCGAC GACGCTGGAG AATTTCTCGA TGACCGTATC
GATCTCGCCG CGCCACCGTT TGCCGAGATT CGCGAACTGG AGCAAGCCAG TCGGGCACTG
GAGGAAGACG TCGACAACAT CGCCCCGGAC GGTCGCGATT GGCTATCGAT GCTCATCGCG
CCCGGAGGCT CGCTCGGTGG CGCGAGACCG AAAGCCAGCG TAGCCGACGA TCTCGGGCAT
CTGTATATCG CGAAGTTCCC GAGCGCGCGA GACGACTACG ACATAGGCGG CTGGGAAATG
GTCGTCAATG CACTGGCGGT CGGCTGCGGC CTGAACGTCG CCCAAGCCCA AGCGCGAAAA
TTCGCCAGCG ACTATCACTG CTTCCTGGTG CGACGCTTCG ATCGGACTCC CGATGGTGGC
CGGCTGCATT TTGCATCGGC CATGACGATG ACCGGCCATG TCGACGGCGA CGATGCATCC
ACCGGCGTCA GCTACCTGGA ATTGGCGGAA GTCCTCATGC GACACGGCGC GCAACCGAAT
GCCGACCTGC GCGAACTATG GACCCGGATC GTCTTCAACC TTCTGGTCTC GAATACCGAC
GATCATCTTC GCAATCACGG GTTCATTCTC GAACCCGGTG CGGGCTGGCG ACTCTCCCCA
GCCTACGACA TGAATCCCGT TGCCGTAGCC GAGGGCCTCA AGCTCAACAT CACGGAAGCC
GATAACGCGC TGGACCTCGA ACTCGCCCGC GACGTATGTG AATATTTTCG GCTGAGCCTG
AAGGATGCCG ACGAGATCAT CGACGACTTC CGCGACATCG TTGGCCAATG GCCCACGCTC
GCGACACGAC TCGCGCTTTC CACGCGGGAA CAGGAGCGCA TGGCCGACGC GTTTCGCCTC
GCGGGCAACT GA
|
|---|
| Protein sequence | MTTISVYADW SGLPTPLKLG LLHGRQTRAS ERFEFRYDAA ALASPELAGV QLDPGIGLFE
GPQYPLPPRN AFGAFADSSP DRWGRMLMDR RLERDIRAGI RPKGTRLHES DYLLGVHDLY
RVGALRYKLD DAGEFLDDRI DLAAPPFAEI RELEQASRAL EEDVDNIAPD GRDWLSMLIA
PGGSLGGARP KASVADDLGH LYIAKFPSAR DDYDIGGWEM VVNALAVGCG LNVAQAQARK
FASDYHCFLV RRFDRTPDGG RLHFASAMTM TGHVDGDDAS TGVSYLELAE VLMRHGAQPN
ADLRELWTRI VFNLLVSNTD DHLRNHGFIL EPGAGWRLSP AYDMNPVAVA EGLKLNITEA
DNALDLELAR DVCEYFRLSL KDADEIIDDF RDIVGQWPTL ATRLALSTRE QERMADAFRL
AGN
|
|---|
| |