Gene Bamb_5404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5404 
Symbol 
ID4314293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2451144 
End bp2451857 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content70% 
IMG OID638153245 
Producthypothetical protein 
Protein accessionYP_777285 
Protein GI115360147 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCCGG GACGGGCGCC TTTTGCCATG CGTATCGACG TACAGCATTC CCAGCACGAC 
ATCGACGATG AACTCGACAC GCTCCATGCG CGTCTGCACC ATCCGGGCCA TCGCCTGCAC
GGCCTGCCGG CCGTCGCGCT CGGCGACTCG GGCCTGATCG TCCGCCACCG CGAGGCGGAC
GGCGAATACT TCCTTTACAT CGAGGATCCG TCGGCCCGGC AGCTCGCCGG CTACACGATC
TTCAACCGCT TGCCCGAACT CCCGCGCCGC GCGGACCGCT ACCTGCGCGC CCCGCATACG
CGGCTGCGCG GGTCCGCGCA ACGCAAGGGC CTCGCGACGA CGCTCTATCG CTGGGCGCTC
GACGCGGGGC TGTGCCTGAT CAGCGGCGCC CGGCAGTCGG TCGGCGCGGC GCAGCTGTGG
GCCACGCTCG CGCACGAGTA CCGGCACGGC TTCGTCGACG TCGAAGGCCG CGCGCTGCGT
TATCTCGGCG AAGCCGTCGC GGACCACGTG CACGGCGCGC TGCATACGCG CCGGCTGTTG
CTCGGCAACG GGTGGACGCT CGGTGAACTG GCGCGGGCAA CGGGGATGAC GGACGTCGCT
GGCGCAAGGT GTCAGGACGC GAGATTTCAG CAGGAGGAAC GCGAACTCGC CCATCTGCAC
CGGGCCGCCA GCGCGCGTCA CGTCGCTCAC GCCGATCACG CGTCGATGCG ATAA
 
Protein sequence
MRPGRAPFAM RIDVQHSQHD IDDELDTLHA RLHHPGHRLH GLPAVALGDS GLIVRHREAD 
GEYFLYIEDP SARQLAGYTI FNRLPELPRR ADRYLRAPHT RLRGSAQRKG LATTLYRWAL
DAGLCLISGA RQSVGAAQLW ATLAHEYRHG FVDVEGRALR YLGEAVADHV HGALHTRRLL
LGNGWTLGEL ARATGMTDVA GARCQDARFQ QEERELAHLH RAASARHVAH ADHASMR