Gene Bamb_5401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5401 
Symbol 
ID4314290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2449199 
End bp2449843 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content70% 
IMG OID638153242 
Producthypothetical protein 
Protein accessionYP_777282 
Protein GI115360144 
COG category[N] Cell motility 
COG ID[COG1360] Flagellar motor protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.911542 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGACG AAATCGACGA CGGCACGCCT TCCGCGCCGG TGTGGCCCGC GTTCGCCGAC 
CTGATGTCGG TGCTGCTCGG CGCGTTCGTG CTGATTCTCG TCGGCGTGAT CGGCATGCAG
TTGCAGCTCA CGTCGAAGCT CGAGGAAGCC GTGCGTGCGC GCCAGCAGGA GGCGCAGCAG
CGCAAGTCGC TCGAACAGGC GCTCGCCGGG CCGCTCGCGG CCGGCCGCGT GACGCTCGTG
AACGGCCGCA TCGGCATCAG CGGCGCCGTG CTGTTCGCAC TGAACTCCGA CCAGCTGCAG
CCCGACGGCC GCGATCTGCT GAAGACGCTG GCCGGGCCGC TGGCCGCCTA TCTGACGACG
CGCGACGAGA TCCTGATGAT CAGCGGCTTC GCCGACGACC AGCAGGTGCG CGCCGGCAAC
CGCCAGTTCG CGGACAACTG GGAGCTGTCG GCCAAGCGCG CGCTGACGGT CACGCGGGCG
CTGATCGACG CCGGCGTGCC GGCGCGGTCG GTGTTCGCGG CCGCGTTCGG TTCCGAGCAG
CCGGTCAGCT CGAATGCGGA CGACGAAGGC CGCGCGAAGA ACCGTCGCGT GGAGATCGCA
CCGGTGCCGC GCAAGTCCGC ATCGAACGGA GGGAAGCCGA AGTGA
 
Protein sequence
MHDEIDDGTP SAPVWPAFAD LMSVLLGAFV LILVGVIGMQ LQLTSKLEEA VRARQQEAQQ 
RKSLEQALAG PLAAGRVTLV NGRIGISGAV LFALNSDQLQ PDGRDLLKTL AGPLAAYLTT
RDEILMISGF ADDQQVRAGN RQFADNWELS AKRALTVTRA LIDAGVPARS VFAAAFGSEQ
PVSSNADDEG RAKNRRVEIA PVPRKSASNG GKPK