9 homologs were found in PanDaTox collection
for query gene Bamb_5397 on replicon NC_008391
Organism: Burkholderia ambifaria AMMD



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007511  Bcep18194_B2459  hypothetical protein  75.93 
 
 
403 aa  635    Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_008391  Bamb_5397  hypothetical protein  100 
 
 
418 aa  846    Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_3557  hypothetical protein  99.5 
 
 
403 aa  812    Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.326314 
 
 
-
 
NC_013235  Namu_0869  hypothetical protein  30.57 
 
 
358 aa  81.3  0.00000000000003  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_2621  hypothetical protein  31.05 
 
 
272 aa  73.9  0.000000000004  Roseiflexus sp. RS-1  Bacteria  normal  0.353438  normal 
 
 
-
 
NC_009767  Rcas_1796  hypothetical protein  30 
 
 
272 aa  67  0.0000000006  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_5442  hypothetical protein  25.42 
 
 
406 aa  57.8  0.0000004  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.625584 
 
 
-
 
NC_009972  Haur_3771  hypothetical protein  31.29 
 
 
277 aa  55.8  0.000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0214  hypothetical protein  29.59 
 
 
269 aa  53.5  0.000008  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
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