| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5384 |
|---|
| Symbol | |
|---|
| ID | 4314273 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | - |
|---|
| Start bp | 2427783 |
|---|
| End bp | 2429012 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 638153225 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_777265 |
|---|
| Protein GI | 115360127 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2807] Cyanate permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACC CCGCCACCGC GCAAGCCGTT CCGCGTCCGC ACGCGGCTTC CGTATCCTAT
GGCGCGCTCG CACTGCTCGT GCTGGCCGGC CTCAACCTGC GTCCGTTCCT GACCGCGTTC
GGCCCCCTGC TCGACCTCGT ACGCGCCGAC ACCGGCCTCG GCTTCCGCGC GGCCGCGCTG
CTGACCACGC TGCCGTTCGT GCTGATGGGC GTCGTCGCCG GCATCGGTGT CGGGCTCGCG
CGGCGCGTCG GCGAACAACG CGCGCTGAGC GTCGCGCTGG CGCTGATCGC CGCGGGTTGC
ACCGCACGCC TGTGGACCGG TGGCAGCACC GGGCTAGTGG TCACCGCGAT CGTCGCGGGC
GCGGGCGTCG CGGTGATCCA GTCGCTCGCA CCCGGCCTCG CCAAGCGCTG GTTCGTCGAC
CGGCTGCCGC TCGCGATGGG GCTTTATTCG GCCGCGCTGG TCGGCGGCGG CGCATTCGGC
GCGATCGCGA GCCCGTGGCT CGCCGCGCAT GGCGGCTGGC ATCTGTCGCT CGCCGTGTGG
GCCGTGCCCG CGCTCGTCAC GCTCGCGCTG TGGCGCGCGA AGGCGCCCCG CGACGCGGTG
CACGCCACGA CGGCATCGGC GCCCGTCACC GCGTTCGCAC GGATTCCGCG TGCGTGGCAG
CTCGCGCTGT TCTTCGGCCT CAGCAACAGC GGCTATGCGA GTCTCGTCGC GTGGTTGCCC
GCGTTCTATC GCAGCGTCGG CATGAGCCCG CAGGCGAGCG GCAACCTGCT CGCGTGGATG
GCGCTTTTCC AGGCAATCGG CGCGCTCGCG ATGCCGCTGC TCGCGAAACG TTCGCACGAT
CGCCGCGCCG TGCTGTGGCT CACGCTCGCG TTGCAGGCGG CCGGCTTCGT CGGCTTCGCG
ACGATGCCCG CGTTCGCGCC GTGGCTGTGG GTCACGAGCG TCGGCCTCGG GCTCGGCGGC
TTCTTCTCGA TGAGCCTGAT CGTCACGCTC GACCATCTGC CCGACGCGCG GCTCGCGGGC
GCGCTCGCCG CGTTCGTGCA GGGCATCGGC TTCCTGATCG TCGCCGCGAG CCCGTGGTTG
ATCGGCGGGC TGCGCGACGT GGGCGGCGGC TTCGCGATCG CGTGGTGGCT GCACGTCGGC
GTGATCGCGT CGACGGCCGC GTTGAACGCC ATGTTCTCGC CGGCCGGCTA CCGGCGCAGC
ATGGCGCGCA TCACAGGCGC CATGTGCTGA
|
|---|
| Protein sequence | MTDPATAQAV PRPHAASVSY GALALLVLAG LNLRPFLTAF GPLLDLVRAD TGLGFRAAAL
LTTLPFVLMG VVAGIGVGLA RRVGEQRALS VALALIAAGC TARLWTGGST GLVVTAIVAG
AGVAVIQSLA PGLAKRWFVD RLPLAMGLYS AALVGGGAFG AIASPWLAAH GGWHLSLAVW
AVPALVTLAL WRAKAPRDAV HATTASAPVT AFARIPRAWQ LALFFGLSNS GYASLVAWLP
AFYRSVGMSP QASGNLLAWM ALFQAIGALA MPLLAKRSHD RRAVLWLTLA LQAAGFVGFA
TMPAFAPWLW VTSVGLGLGG FFSMSLIVTL DHLPDARLAG ALAAFVQGIG FLIVAASPWL
IGGLRDVGGG FAIAWWLHVG VIASTAALNA MFSPAGYRRS MARITGAMC
|
|---|
| |