| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5357 |
|---|
| Symbol | |
|---|
| ID | 4314246 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | - |
|---|
| Start bp | 2398177 |
|---|
| End bp | 2399157 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638153198 |
|---|
| Product | ferredoxin |
|---|
| Protein accession | YP_777238 |
|---|
| Protein GI | 115360100 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.577974 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGCGA ACCGCCACCA GGTCCGGATC GATGCGCTGA TCGACGCGGC GCAGGACATC
CGCTGTTTCC GGGTCTCGCG TGTCGACGGC CAGCCGTTCG ACGCGTACGA GCCGGGCGCC
CATATCGACG TCACTGCGCC GTCCGGCGTC ACGCGGCAGT ATTCGCTGTG CGGCCGCCCC
GACGAGCGCG GCAGCTATCT GTTCGCGGTG AAGAAGGAAG CGCGCTCGCG CGGCGGCTCG
CGCTCGCTGC ACGACGACGT GTGCGTCGGC GCCGAGCTGT CGATCGGCGC GCCGCGCAAC
CTGTTTCGTC TGACGGACGA CGCAAGCGAA CATGTGCTGA TCGCGGCCGG GATCGGCATC
ACGCCGCTGC TGTCGATGGC GTATGCACTC GAGCAGCGCG GCGCGCGCTA CCGGTTGCAC
TACTTCGCGC GCAGCCGGGA ACACGCGGCC TTCGTCGACG AACTGTCGGC CGACCCGTTC
GCCACGCACG TGACATTCCA CTACGGCATC GAGCCCGATG CGCTGGCGGC CGAGCTCGGC
CGCTGCGTCG AAGCGATCGA TGCGCGCGCC CATGTGTACA CGTGCGGCCC CGGCCCGTTC
ATGGATGCGG TCGTCGCGGC GGCGGCCACG CGGATTCCCG AGGATGCGAT TCATCTCGAA
CGCTTCGCGG CGGAACCGGC CGCGGCCGAT GCCGCCACGG ATGCCGCGCC GGCCGAAGGC
TTCGAAGTGC GGCTGCAGCG CAGCGGGCAA TCGGTGCGCG TCGCGCCCGA CACGTCGATC
GTCGACGCGC TCGCGCGCAT CGGCATCGAG GTCGACACGT CATGCGGCGA AGGCGTGTGC
GGCACCTGCA TGGTGCCGGT GCTCGACGGT GAGCCCGATC ATCGCGACCA CTGCCTCAGC
AAGGCCGAGC GCGCGAGCAA CACGGTGATC TGCTGCTGCG TGTCGCGTGC GCGCTCGGCG
GTGCTCGTCC TCGATCTTTG A
|
|---|
| Protein sequence | MQANRHQVRI DALIDAAQDI RCFRVSRVDG QPFDAYEPGA HIDVTAPSGV TRQYSLCGRP
DERGSYLFAV KKEARSRGGS RSLHDDVCVG AELSIGAPRN LFRLTDDASE HVLIAAGIGI
TPLLSMAYAL EQRGARYRLH YFARSREHAA FVDELSADPF ATHVTFHYGI EPDALAAELG
RCVEAIDARA HVYTCGPGPF MDAVVAAAAT RIPEDAIHLE RFAAEPAAAD AATDAAPAEG
FEVRLQRSGQ SVRVAPDTSI VDALARIGIE VDTSCGEGVC GTCMVPVLDG EPDHRDHCLS
KAERASNTVI CCCVSRARSA VLVLDL
|
|---|
| |