Gene Bamb_5351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5351 
Symbol 
ID4314240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2391764 
End bp2392957 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content73% 
IMG OID638153192 
Productacyl-CoA dehydrogenase type 2 
Protein accessionYP_777232 
Protein GI115360094 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.901542 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.800296 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAACG CCGCCCTCGC CATCGACGCC GCGTCCCCCT CGCCGCACGC GGTCCGTGAA 
GCGGCCGCGC GGGTGTCGCC GCTCGACGCC GTGATCGAGA CCGTCGCCGC GCGCCGCGAC
GAATTCGACC GCCTGTCGCA CGTGCCGCGC GACGTGATCG CGCTGTTCAA GAAAGCCGGC
ATCTATCGCG CGGGCACGCC GCGCCGCTTC GGCGGCGACG CGCTCGCGCC GGGCGCGTTC
CTCGACATGA TCGAGCGGAT CGCGACCGCC GACGGGTCGG CCGCGTGGGT CGCGAGCTTC
GGCTCGGCCA ACGTCTATCT CGCCGCGCTG CCGCTCGCCA CGCAGGCCGA GCTGTACGCG
AGCGGCCCCG ACCAGGTGTT CGCGGGCGGG CTGTTCCCGG TGCAGCCGGC GCAGGCGGCC
CCCGGCGGCT GGCGCGTGAA CGGCACGTGG AAATTCGCGA GCGGCTGCAA GGGCGCCGAC
TGGCTCGGCG TCGGCATCGC GGTGCCCGGC GCGCAGGATG CCGCGCCGAA CAAGCCGCGC
ACGGCCGTGT TCCGTGCCGC CGACGTCGAG ATCGTCGAGA ACTGGAGCGT GGTCGGCATG
CAGGGCACCG GCAGCCACGA CCTGCGCGTC GACGATCGCT TCGTGCCGGA AGCGTGGACC
TTCGTGCGCG GCGGCGAGGC AACCGTCGAC GAGCCGCTGT ACCGCTATCC GACCGTCGCG
TATGCGGCGC AGGTGCTCGC CGTGGTCAAC CTCGGGCTGG CCCGCGCGGC GCTCGACGTC
GCGAACCGGA TGTCGGGCGG CCGCCAGACG ACCACCGGCG CGCCGCGCCT CGCCGATCGC
GCGTATTTCC GCATCGAACT CGCGAAGGCC GAAGCGCAGT TGCGCTCGGC GCGCGCGTTC
TTCTACGACG CGACCGACTC GGTCTGGCAA TCGATCCTCG CGGGGAACCC CGTCACACCC
GAGCAGGTCA GCCTGCTGAG GCTCGCCGCC ACGCACATCG CCCGCGAAGG CGCGAGCGTC
GTCGAGCGCG CGTATCGCCT CGGCGGCACG GCCGCGATCT ATCGCACGCA TCCGCTGCAG
CGCCTGCTGC GCGACGCGAT GGTCGTCACG CAGCACGCGT TTCTCGGCGA AGGCAACTTC
GACGGCGCGG GCGCGGTGTT CACCGGCGTC ACGCCGTTTC CCGGCTATCT GTAA
 
Protein sequence
MPNAALAIDA ASPSPHAVRE AAARVSPLDA VIETVAARRD EFDRLSHVPR DVIALFKKAG 
IYRAGTPRRF GGDALAPGAF LDMIERIATA DGSAAWVASF GSANVYLAAL PLATQAELYA
SGPDQVFAGG LFPVQPAQAA PGGWRVNGTW KFASGCKGAD WLGVGIAVPG AQDAAPNKPR
TAVFRAADVE IVENWSVVGM QGTGSHDLRV DDRFVPEAWT FVRGGEATVD EPLYRYPTVA
YAAQVLAVVN LGLARAALDV ANRMSGGRQT TTGAPRLADR AYFRIELAKA EAQLRSARAF
FYDATDSVWQ SILAGNPVTP EQVSLLRLAA THIAREGASV VERAYRLGGT AAIYRTHPLQ
RLLRDAMVVT QHAFLGEGNF DGAGAVFTGV TPFPGYL