| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5318 |
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| Symbol | |
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| ID | 4314207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 2359969 |
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| End bp | 2361780 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638153159 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_777199 |
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| Protein GI | 115360061 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components
[COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0891799 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTCCT GGCTCGACTA CACGCTCAAC GGCCTCATCG TCGGCAACAT CTACGCGCTG
CTCGCGGTCG GGCTCGCGCT GATCTTCGGC GTGTCGCACC TGATCAACTT CGCGCACGGC
TCGGTCTACA TGGTCGGCGC GTTCATCGGC TGGCTGTGCC TGACGCGCTT CGGGCTGCCG
CTGCCGGTCG CGCTTGCCGC GGTCGTCATC GGTTGCGGCG CGCTCGGCGT CGCGATCGAA
CGGATCGGGC TGCGGCCGCT GCGCCACGCG GCACGCATCG CACCGCTGCT CGCGACGATC
GGCATCAGCT TCATCCTCGA CCAGCTCGCG CAGCTCGCAT TCGGCGCGGA CCCGCGCGCG
GTGCCGACGC CGCTGCCCGA CTGGCATCTG CGAATTGCCG GCGCAACGCT CGGCTCGCTC
GACCTGCTGA TCGCGGGCAT CGGCATCGCG GCGGCCGCGC TGCTGTACGG CTTCCTGCGA
TTCACGCGGC TCGGCTGGGC CGTGCGCGCG ACCGCGCAGG ATCGCGACGC GGCGCTGCAG
ATGGGTGTCG ACGTCGATCG CGTGAACCAG ACCGTGTTCG CGATCGCATG CGCGCTCGGC
GGCGTGAGCG GGCTGCTGGT CGGCATGTAC TACAACAGCA TCGATCCGGC GATGGGCTTC
CAGGCAACGC TGAAGGGCGT GGTCGCGCTG CTGATCGGCG GGCTCGGCAA CGTGCCGGGC
GCGATTGCCG GGAGCCTGCT GCTCGGCCTC GTCGAAAGCT ATGGCGTCGC GCTGTTCGGC
ACCAGCTATC GCGACCTGTT CGCGTTCGGA TTGCTGATCG TGTTCCTCGT GTGGCGGCCG
AACGGCTTGT TCAGTGCGAA CCGCGCATTG CCGCCCGAGC CGATGACGGG GACCTTCCTC
GCGGCCGCGA AGGCCGTGCG CGCGCCGCGC CCCGTACTTG TCGTACTGAT CGTGGCGGCC
GCCGTACTGC CGTGGCTCGG TGCATCGTCG TACGTGCTGC AGACGCTGAC CAACGCGTGG
CTGTACGGGC TGCTCGCGCT GAGCCTCACG CTCGTCGCGG GCACGGTCGG GCAGATCTCG
CTCGGCCACG CGGCGCTGCT CGTGATCGGT GCGTATGCGT CGGCGCTGCT GTCGTCGGAT
CTCGGCTGGT CGGCGGCCGT GACGATCCCG TGCGCGGGCG TCATCACCGC CGTGCTCGGC
ACGTTGCTCG TCTATCCGGC GTTCCGGCTG CGCGGGCATT ACGTGTCGAT CGCGACGCTC
GGCATCGGCG AAGTGGTGAG CCTCGTGATC CTGAACTGGG ACGGCCTCAC GCGTGGCCCG
CTCGGCATCA CCGGCATCGC GCCGCTGCCG TGGGCGGCGA CCGCGCGTGC CGCGTACTGG
TTCACGTTCG CGGTGCTCAT CGTGTTCGCG CTCGTGCAGG TGCGGCTGCT GCGTTCGCAT
CTCGGCCGCA CGCTGCGCGC GGTGCGCGAG GATGATGTCG CCGCCCGTGC GCACGGCATT
GCGCCGAACC GCTACAAGGC GATCGCGTTC GCGGTCGGCG GCGTCGCGGC CGGCGTGAGC
GGCGGGATCG CCGCGCACCT GTACAGCTAC ATCAATCACC AGACCTTCGA TTCGCAGGTG
TCGATCCTCG CGCTGACGAT GGTGATCCTG GGCGGCCTCG GCAACGTGCT CGGCGGCATC
GTCGGCGCGA TCGCGCTGAT CGGCCTGCCC GAGCTGTTCC GCTGGGCGGC CGACTACCGG
ATGCTGATCT ACGGCCTCGT GCTGCTGCTG CTCGTCCGGT TCCGGCCGCA GGGCCTGCTC
GGCACGGTGT GA
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| Protein sequence | MASWLDYTLN GLIVGNIYAL LAVGLALIFG VSHLINFAHG SVYMVGAFIG WLCLTRFGLP
LPVALAAVVI GCGALGVAIE RIGLRPLRHA ARIAPLLATI GISFILDQLA QLAFGADPRA
VPTPLPDWHL RIAGATLGSL DLLIAGIGIA AAALLYGFLR FTRLGWAVRA TAQDRDAALQ
MGVDVDRVNQ TVFAIACALG GVSGLLVGMY YNSIDPAMGF QATLKGVVAL LIGGLGNVPG
AIAGSLLLGL VESYGVALFG TSYRDLFAFG LLIVFLVWRP NGLFSANRAL PPEPMTGTFL
AAAKAVRAPR PVLVVLIVAA AVLPWLGASS YVLQTLTNAW LYGLLALSLT LVAGTVGQIS
LGHAALLVIG AYASALLSSD LGWSAAVTIP CAGVITAVLG TLLVYPAFRL RGHYVSIATL
GIGEVVSLVI LNWDGLTRGP LGITGIAPLP WAATARAAYW FTFAVLIVFA LVQVRLLRSH
LGRTLRAVRE DDVAARAHGI APNRYKAIAF AVGGVAAGVS GGIAAHLYSY INHQTFDSQV
SILALTMVIL GGLGNVLGGI VGAIALIGLP ELFRWAADYR MLIYGLVLLL LVRFRPQGLL
GTV
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