Gene Bamb_5310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5310 
Symbol 
ID4314199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2351848 
End bp2352888 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content68% 
IMG OID638153151 
Productamidinotransferase 
Protein accessionYP_777191 
Protein GI115360053 
COG category[S] Function unknown 
COG ID[COG4874] Uncharacterized protein conserved in bacteria containing a pentein-type domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCCGCC CGCTCTCCTG CCCTTCGCTC CCGCCTTTCA TGAATCTCGT ATCGATCCAG 
GCGCCGTCCG CCGTCGTGAT GATCCGGCCG CACCGCTTCG TGCCGAACCC GCAGACCGCG
GCCGACAACG CCTTTCAGCG CACGGCCGGC AACGGCGCGG GCAGCCCGCC GTCGGTGTCG
GCCGCCGCGC GCGACGAGGT CACGGCCGCC GCGCGGATGC TCGCCGATGC GGGCGTACGC
GTGCACGTGT TCGACGACCA CGGCGAGCGC GACACGCCCG ACTCCGTGTT TCCGAACAAC
TGGTTCTCGA CGCATCCGGG CGGGCACGTC GCGCTGTATC CGATGTACAG CGCGAACCGC
CGCCGCGAAC GGCGCGCGGG CGTGATCGAG ATGCTGAAGG CCGAGTACCG CGTGCAGGAC
GTGATCGACT ACTCGGGGCT CGAATACGAC GACGTATTCC TGGAAGGCAC GGGCGCGATG
GTGCTCGATC ACGTCGCGCG GATCGCGTAC ACCGCGCGCT CGCGCCGTGC CGATCCGGTC
GCGCTCGAGC GCTTCTGCAC GAATTTCAAC TTCGAGCCGA TCTGCTTCGA CACGGCCGAC
GCGAACGGAA AGCCGATCTA TCACACGAAC GTGATGATGA GCGTCGCGAC CGAATTCGCG
ATGGTCGGCC TCGACCTGAT CGCGGATCGG CGGCGCCGCG ACGAGATCGC GCAACGTCTG
ACCGAGACGG GCCGCACGGT GATCGCGCTC GATCACGCGC AGATCGCGAA CTTCGCGGGC
AATACGCTGG AACTGTCGGG CAAGGACGGG CGCGTGCTCG CGTTGTCGCG GCGTGCGTTC
GACTGCCTCA CCGGCGCGCA ACGCGAGACG ATCGCACGCT CCGCGCGGCT GCTGCCGCTC
GACGTGCCGA CGATCGAGCT GGCCGGCGGC TCGGTGCGCT GCATGCTCGC GGGCATTCAC
CTCGCGCGGC GCGCGGCAAC TCGTGACGTG AAAGCAATCG AATCGGTGGA ACGGCAACGC
GAGCTCGTGC CGCATACCTA A
 
Protein sequence
MRRPLSCPSL PPFMNLVSIQ APSAVVMIRP HRFVPNPQTA ADNAFQRTAG NGAGSPPSVS 
AAARDEVTAA ARMLADAGVR VHVFDDHGER DTPDSVFPNN WFSTHPGGHV ALYPMYSANR
RRERRAGVIE MLKAEYRVQD VIDYSGLEYD DVFLEGTGAM VLDHVARIAY TARSRRADPV
ALERFCTNFN FEPICFDTAD ANGKPIYHTN VMMSVATEFA MVGLDLIADR RRRDEIAQRL
TETGRTVIAL DHAQIANFAG NTLELSGKDG RVLALSRRAF DCLTGAQRET IARSARLLPL
DVPTIELAGG SVRCMLAGIH LARRAATRDV KAIESVERQR ELVPHT