| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5268 |
|---|
| Symbol | |
|---|
| ID | 4314157 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | + |
|---|
| Start bp | 2306657 |
|---|
| End bp | 2307448 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638153109 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_777149 |
|---|
| Protein GI | 115360011 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.744913 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.596903 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGGTT TGACGAAACG GGTGCTGGTG TCCGCGGCGG TGCTGGGCGG CTTGTTCGGT
GCGGTCGCGG CGCAGGCTGC GCCGAAGGAG GACCTGAAGG GCACGAACGT CGTGCTGGTG
CACGGCGCGT TCGCCGACGG GTCGAGCTGG AACCGCGTGA TTCCGCTGCT CGAGGCGCGC
GGCCTGCATG TCGTAGCGGT GCAGAATCCG CTCAGCTCGC TCGCCGACGA TACCGCCGCG
ACGAAGCGCG CGATCGACGA GCAGAAGGGG CCCGTCGTGC TGGTCGGCCA TTCGTGGGCC
GGCGTCGTGA TCAGCGATGC GGGCAACGAC GACAAGGTGA AGTCGCTCGT CTACGTCGCC
GCGTTCGCGC CGGACAACGG CCAGTCGATC GCCGACGTCA CGCAGGGGCT GCCGGCGCCG
GCGTGGGCCG GCGAGCTGCG CAAGGACACG GGCGGTTTCG CGACGCTGTC GGACAAGGCG
ATCGCGCAGG ATTTCGCGCC CGACCTGTCG CCCGCGCAGC AGCGCGTCGT CGCGGCGACG
CAAGGGCCGT GGTACGGTGG CTGTATTTCG CAGAAGGTCA CGCAGGCCGC GTGGCATGAG
AAGCCGTCGA CGTTCGTCGT CGCGACGCAG GACCGGATGA TCGATCCGAA GCTGCAGGAA
ACGATGGCGA AGCGGATCGG CGCGACGGTC GCGCGCGTGA ACGGCAGCCA CGTATCGATG
TTGAGCCAGC CGAAGGCCGT GGCCGACGCG ATCATCGCGG CCGCGGAGCG TGCGAAGCAC
GATACGCAGT AA
|
|---|
| Protein sequence | MVGLTKRVLV SAAVLGGLFG AVAAQAAPKE DLKGTNVVLV HGAFADGSSW NRVIPLLEAR
GLHVVAVQNP LSSLADDTAA TKRAIDEQKG PVVLVGHSWA GVVISDAGND DKVKSLVYVA
AFAPDNGQSI ADVTQGLPAP AWAGELRKDT GGFATLSDKA IAQDFAPDLS PAQQRVVAAT
QGPWYGGCIS QKVTQAAWHE KPSTFVVATQ DRMIDPKLQE TMAKRIGATV ARVNGSHVSM
LSQPKAVADA IIAAAERAKH DTQ
|
|---|
| |