Gene Bamb_5233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5233 
Symbol 
ID4314123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2272733 
End bp2273161 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content66% 
IMG OID638153075 
Producthypothetical protein 
Protein accessionYP_777115 
Protein GI115359977 
COG category[S] Function unknown 
COG ID[COG5642] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02293] putative toxin-antitoxin system antitoxin component, TIGR02293 family 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACTCG TTACCCCTGA AGCGGTGGCC GCGGTCATGG ATCTGCACCC CGTTCCGCAT 
ACGCTGGCCG AGCTCGAGGC GCTTGTGCGC GAAGGCCTGC CGAAGTCTGC CCTGCGCGCC
GGCGTCGAAC ATGCGACGCA AGGTGCCGAC GCTCGGCGTG CGCTCCTCGC CCGCATCATC
CCCGAGGCGA CCTATAAGCG CCGCCGCGAT CGACTGACGC AAGACGAATC GGAGAAGACC
GAGCGCCTGG CCCGGATCGT TGCGACGACC ACCTACGTCT GGAATGACGA AGAAGACGCG
CGGGAATTCC TGTCGACGCC GCATCCGGAA CTCGAGGGGC GCGCGCCGCT CGATGTCGCG
CTGACCGAGC TCGGTGCGCG CCGAGTCGAA GAGCTGCTCT GGAAACTGTT CTATGGGCTG
CCGGCATGA
 
Protein sequence
MSLVTPEAVA AVMDLHPVPH TLAELEALVR EGLPKSALRA GVEHATQGAD ARRALLARII 
PEATYKRRRD RLTQDESEKT ERLARIVATT TYVWNDEEDA REFLSTPHPE LEGRAPLDVA
LTELGARRVE ELLWKLFYGL PA