| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5157 |
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| Symbol | |
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| ID | 4314048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 2189002 |
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| End bp | 2190723 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638153000 |
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| Product | pyruvate dehydrogenase |
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| Protein accession | YP_777040 |
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| Protein GI | 115359902 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAGAC AGACGATGGC GGAATACCTG GCGAAGACGC TGGCGGCAGC GGGCGTCGAG
CGCATCTGGG GCGTGACGGG CGACAGTCTG AACGGGCTGT CGTTCAGCCT GAGCCAGATG
GGCTCGATCC GCTGGATGCA TACGCGTCAC GAGGAAAGCG CCGCGTTCGC GGCCGGCGCG
GATGCGGCAT CGACCGGCCG GCTCGCGGTG TGCGCGGGCA GCTGCGGCCC CGGCAACCTG
CACCTGATCA ACGGCTTGTA CGACTGCCAC CGCAATCACC AGCCGGTGCT CGCGATCGCC
GCGCATATTC CGTCGACCGA GATCGGTCTC GGCTACTTCC AGGAAACCCA TCCGCAGGAA
CTGTTCCGCG AATGCAGCCA TTTCGCGGAA CTCGTGACCA ACGCGTCGCA GTTCCCGCGC
GTGCTCGCCC GCGCGATGCG CACGGCGATC GAGGAACGCG GCGTCGCGGT GATCGTGCTG
CCGGGCGATA TCGCGCTCGG CGACGGCCCG GAAGAAGCGC CCACGTGGAG CGAATCGGCG
CCGCCGTCGA TCCTGCCGGC TGACGCCGAT CTCGACCGGC TCGCGGCGCT GCTCAATGCA
TCGGACGCGG TCACGCTGCT GTGCGGCAGC GGCACGCAGG GCGCGCACGA CGAAGTGGTC
GCGCTCGCCG ACACGCTCGG CGCGCCGGTC GTGCATGCGC TGCGCGGCAA GCAGTTCGTC
GAATGGGACA ATCCGTTCGA CGTCGGGATG ACGGGGCTGA TCGGCTTCAG CTCCGGCTAT
CACGCGATGG AGGCGTGCGA CACGTTGCTG ATGCTCGGCA CGGATTTCCC GTATCGCCCG
TTCTATCCGG CGCACGCAAA GGTCGTGCAG ATCGACTGGA AGGGCTCGCA GCTCGGCCAT
CGCGCGCCGC TCGCGCTCGG GCTTGTCGGC ACCGTGAAGG AAACGATCGC GGCACTCCTG
CCGCGCCTCA CGCGCAAGAC GCAGCGGCGC TTCCTCGAGA ACGCGCTGAA GCACTACGCG
GCCGCGCGCA AGGGGCTCGA CGATCTCGCG GTGGCCGAGC CGCCGGGCCG CGCGATCCAT
CCGCAATACC TGACGAAGAT CGTCGACGAA GTCGCGGCCG ACGACGCGAT TTTCACGGCC
GACGTCGGCA CGCCCACATT GTGGGCCGCG CGCTATCTGA CGATGAACGG CAAGCGCCAG
CTGCACGGCT CGTTCAATCA CGGCTCGATG GCCAACGCGA TGCCGCAGGC GCTCGGCGCG
CAGGGCGCGC ATCCGGGGCG GCAGGTCGTG TCGCTGTCGG GCGACGGCGG GCTGTCGATG
CTGCTCGGCG ATCTGCTGAG CGCGCGGCAA CTCAACCTGC CGATCAAGAT CGTCGTCTAC
AACAACAGCC TGCTCGGCTT CGTGTCGATG GAACTGAAGG CGGCCGGCTA TCTCGACACG
AACGTCGACC TGAGCCCGAC CGACTTCGCG GCGATCGCGA AGGGCGCGGG GATCTTCAGC
GTGCGCGTCG AGCATTCGGA GAACGTCGAG CACGCGCTGC GCACCGCGTT CGCGCACGAC
GGGCCGGCGG TCGTCGACGT CGTCACGTCG AAGTACGAAC TCGCGATGCC GCCGAAGATC
GAGATTGCGC ATGCGAAGGG GTTCAGTCTG TTCATGCTGC GTGCGATCCT GAGCGGTCGC
GGCGACGAGA TCGTCGAGCT GGCGCGGACG AACCTGCGGT GA
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| Protein sequence | MARQTMAEYL AKTLAAAGVE RIWGVTGDSL NGLSFSLSQM GSIRWMHTRH EESAAFAAGA
DAASTGRLAV CAGSCGPGNL HLINGLYDCH RNHQPVLAIA AHIPSTEIGL GYFQETHPQE
LFRECSHFAE LVTNASQFPR VLARAMRTAI EERGVAVIVL PGDIALGDGP EEAPTWSESA
PPSILPADAD LDRLAALLNA SDAVTLLCGS GTQGAHDEVV ALADTLGAPV VHALRGKQFV
EWDNPFDVGM TGLIGFSSGY HAMEACDTLL MLGTDFPYRP FYPAHAKVVQ IDWKGSQLGH
RAPLALGLVG TVKETIAALL PRLTRKTQRR FLENALKHYA AARKGLDDLA VAEPPGRAIH
PQYLTKIVDE VAADDAIFTA DVGTPTLWAA RYLTMNGKRQ LHGSFNHGSM ANAMPQALGA
QGAHPGRQVV SLSGDGGLSM LLGDLLSARQ LNLPIKIVVY NNSLLGFVSM ELKAAGYLDT
NVDLSPTDFA AIAKGAGIFS VRVEHSENVE HALRTAFAHD GPAVVDVVTS KYELAMPPKI
EIAHAKGFSL FMLRAILSGR GDEIVELART NLR
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