| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5148 |
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| Symbol | |
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| ID | 4314039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 2176144 |
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| End bp | 2176731 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638152991 |
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| Product | Sel1 domain-containing protein |
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| Protein accession | YP_777031 |
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| Protein GI | 115359893 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATCGCC GTTTGCTGGC ACCGGGGCTG CTGTTGCTGT TGGCCGCGTG CGCGCAGGAT
CCGTCCGTTA CACGCAACAC GGTGCGGATC TGCGATGACA CAGGTTGTTC CGATCGCCCT
AAAGATCAGG TGTCCTATCA AAAAAGGGAC GATGCGGACG ACCGCGAAGA TCCGCGCATC
GTCGCGCTGA AGCAGGCCGC GAAGGCGCAG CCCAAGGCCG CCTACGACCT CGGCCTGCGT
TATTTCCGCG GCGACGGCGT GCGCCAGGAC AGCTATCAGG CACTGAAGTG GATGCGCGAC
GCCGCCGAGC GCGGCGACCT GAACGCGCAG AAGGCACTCG GCAGTTTCTA CCTGTTCGGC
CTCGAGGAGA TGGGCTCCGA TCCGCGCGAA GCGGACAAGT GGCTGTCGAT CGCGGCGAGC
CGCGGCGACA AGGAATCGAA AAAGCTGCTC GAGCTCGCCC GCAAGGCCAA GAAGGAAGAC
GAGGAAGACT GGAAATGGCG TACGCAATGG CGTGACGTCT ATTACGGCTA CTGGTACTCG
GGCTATCCGT ACTACGGCGT CTGGAATCAG ACGTACTGGT ACTACTGA
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| Protein sequence | MYRRLLAPGL LLLLAACAQD PSVTRNTVRI CDDTGCSDRP KDQVSYQKRD DADDREDPRI
VALKQAAKAQ PKAAYDLGLR YFRGDGVRQD SYQALKWMRD AAERGDLNAQ KALGSFYLFG
LEEMGSDPRE ADKWLSIAAS RGDKESKKLL ELARKAKKED EEDWKWRTQW RDVYYGYWYS
GYPYYGVWNQ TYWYY
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