Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5132 |
Symbol | |
ID | 4314023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 2163752 |
End bp | 2164573 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638152975 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_777015 |
Protein GI | 115359877 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.717411 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.457646 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGCGC CGCATCCGCC GATGAATGCC CCCATTTCCG AAACGGAACC TGAAACCGAA ACCGTCGCCG AACCGCGCGC GTCACGCGTG CATCGGCCTG TCGCGCTCGT CACCGGATCG ACGTCGGGGA TCGGCGCGGC CATCGCACGG CGCCTGTCGG CGGATGGCTA TGCGGTGATC CTGCATTCGC GCAGCTCCGC CGAGACCGGT CGCGCAATGG CGGCCGAGCT CGGCGCAAGC TACGTGCAGG CCGATCTCGC CGACGATGCG CAACGCGTGC GGTTGATCCG CGACGCGCTC GCGGTGCACG GACGGCTCGA CGTGCTGGTC AACAACGCGG GTGCGAGCCG CGTGATTCCG CACGACGATC TCGCCGCCGC GACGCCCGAC GTGTGGCGCG AGATGCACGA GATCAACGTG ATCGCGCCGT TCCGGCTCGT CGCCGAGGCG CAGCCCGCGC TGCTCGAAGC GGCGTCGAGC GGGCGCGCCG GGTGCGTGAT CAACGTCAGC TCGCATGCGG GCGTGCGGCC GAAGGGCGCG TCGATTCCGT ACGCGGCGGC GAAGGCTGCG CTCAATCACA CGACGCGCCT GCTCGCGCGC ACGCTCGCGC CGGCGATTCG CGTCAACGCG GTGGCGCCGG GGCTCGTCGA TACGCCGCTG ACGGCCGACT GGACCGAAGC GCAGCAGCTC TGGCACGAGC GTGCGCCGAT GCGCCGCGCG GCGACGCCGG ACGACGTCGC GCAGACGGTC GCGATGCTCG TCGCGTCCGA CTACGTGACG GGCGAGATCG TGATGCTCGA CGGGGGAATG AACCTGACGT GA
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Protein sequence | MDAPHPPMNA PISETEPETE TVAEPRASRV HRPVALVTGS TSGIGAAIAR RLSADGYAVI LHSRSSAETG RAMAAELGAS YVQADLADDA QRVRLIRDAL AVHGRLDVLV NNAGASRVIP HDDLAAATPD VWREMHEINV IAPFRLVAEA QPALLEAASS GRAGCVINVS SHAGVRPKGA SIPYAAAKAA LNHTTRLLAR TLAPAIRVNA VAPGLVDTPL TADWTEAQQL WHERAPMRRA ATPDDVAQTV AMLVASDYVT GEIVMLDGGM NLT
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