| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5126 |
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| Symbol | |
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| ID | 4314017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 2157535 |
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| End bp | 2159013 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 638152969 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_777009 |
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| Protein GI | 115359871 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.835239 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.332894 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTACG CCGTGTTGCT GTCGACCTTC GAGCGTGAGG CGGGGCCGCA CGCGGCCACG
CGGATGTCGC AGCAGCAGCG GCTGTACGCA TGCCTGCGCG ATGCGATCCT GGGCGGCCGG
ATCGCCGAAG GCGCGCGGCT CGCTGCCTCG CGCACACTCG CCGACGAACT CGGCATCGCG
CGCAACTCGG TGCTGTACGC GTACGAGCGG CTCGCGTCGG AAGGGTTCGT GACCGGCTCG
CGGCAAGGCA CCGTGGTCGC GCGGATGGGC CTGCGCGGGT CGCGGGTCGG CGCCGCGGCG
CCAGCCGGCG ATACGACGGT GCTGTCGCGG CGCGTCGCGC GGGCCGAGCG CGCGACGAGC
GGCCTCGACG AATCGCTGCC GTTCATGCCG GGCGCGCCGG CCGTCGACAA ATTCCCGCTC
GCGCAGTGGC GGCGCTGCAT CGAACGGGCA TGGCGCACGG CGGGGCCGGC GCAACTCGGC
TACCAGTCGG CCGAAGGCGA TGCGGTGCTG CGGGACGCGA TCGCAGGCTA TCTGCGTGCG
TCGCGCGGCG TGCGCTGCGA CGCTGCGCAG GTGATCGTCA CCGACGGCAC GCAAGGCGCG
CTCGACCTGT GCGCCCGCGC GTTGGCGGAC GCGGGCGATG TCGCGTGGAT CGAGAACCCC
GGTTATCAAG GTGCGCGCAA CGCGTTTCTC GCGGCCGACC TGCGCGTCGA ACCGATCGGC
GTCGATGCAC AGGGGCTCGC GCCGCATCCG GACGACTGGC GTGATCGTGC GCCGAAGCTC
GTCTACATCA CGCCGTCGCA TCAGTATCCG CTCGGCGCGG TGATGAGCCT CGAACGGCGG
CTCGCGCTCG TCGCACAGGC GCGCGCAGCC GGCGCGTGGA TCGTCGAGGA CGACTACGAC
AGCGAGTTCC GCCACCACGG CACGCCGCAC GCGGCCGTGC AGGGGCTCGC CGACGATGCG
CCCGTGATCT ATCTCGGCAC CTTCAGCAAG GTGATGTTTC CCGCGTTGCG GCTCGGCTTC
ATGGTCGTGC CGCCCGCGCT CGCGCAGCCG CTGCGCGACG CGGCGGGCGC GCTGATGCTG
CAGGGCCGCG CGGTCGAGCA GCGCGCGCTC GCGGATTTCA TCGACGCGGG GCATTTCACG
CGGCATCTGC GGCGCATGCG TCGCGTCTAT GCGGAGCGGC GCGACGCGTT GCACGATGCG
CTGGCGCGGC GGCTGGGTAC GCGGCTGACG GTGTCGGGCG GCGCCGGCGG CATGCATCTG
TCCGCGCGGC TCGACGTGCC GGTGGCCGAC ACGGAACTGA GCCGCGTCGC GCAGGCGCAC
GGGCTGATCC TGCGGCCGCT GTCGTCGTTC TGCATGCCGG GCACCGCGCA CGGCTACAAC
GGGCTCGTGC TCGGCTACGG CGGCGTGCCG GCCGAGCGGA TGGACGCGCT CGCGCGCCGG
ATCGGCGAGA TGATCGACCG CGTGCTGGCC GCGCGGTGA
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| Protein sequence | MDYAVLLSTF EREAGPHAAT RMSQQQRLYA CLRDAILGGR IAEGARLAAS RTLADELGIA
RNSVLYAYER LASEGFVTGS RQGTVVARMG LRGSRVGAAA PAGDTTVLSR RVARAERATS
GLDESLPFMP GAPAVDKFPL AQWRRCIERA WRTAGPAQLG YQSAEGDAVL RDAIAGYLRA
SRGVRCDAAQ VIVTDGTQGA LDLCARALAD AGDVAWIENP GYQGARNAFL AADLRVEPIG
VDAQGLAPHP DDWRDRAPKL VYITPSHQYP LGAVMSLERR LALVAQARAA GAWIVEDDYD
SEFRHHGTPH AAVQGLADDA PVIYLGTFSK VMFPALRLGF MVVPPALAQP LRDAAGALML
QGRAVEQRAL ADFIDAGHFT RHLRRMRRVY AERRDALHDA LARRLGTRLT VSGGAGGMHL
SARLDVPVAD TELSRVAQAH GLILRPLSSF CMPGTAHGYN GLVLGYGGVP AERMDALARR
IGEMIDRVLA AR
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