Gene Bamb_5075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5075 
Symbol 
ID4313966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2098451 
End bp2099743 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content69% 
IMG OID638152918 
Productmajor facilitator transporter 
Protein accessionYP_776958 
Protein GI115359820 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTACCG ATCACCGTCA ACGGCGCCAC ACGCTGTGGC TGCTATGCGC GCTTTCGTTC 
ATCCTCTACG TCGACCGCGT GAACCTCGCG ACCGCGGCCG GCGCGATCAA GGCCGAGCTC
GGGCTGTCGA ATACCGAGCT CGGCATCGCG TTCTCCGCGT TCGCCTATTC GTACGCAATC
TGCCAGATCG GCGGCGGGTG GATCGCCGAC CGCTTCGGCG CGCGCATCAC GCTGATCGGC
TGCGGGCTGA TCTGGGTCGC GTCGACGTTC ATGACCGGGC TCGTGCACAG CCTCGCGCTC
CTGTTCGCCG CGCGCCTGCT GCTCGGGATC GGCGAAGGCG CGACGCTGCC CGCGCAGGCC
CGCGCGATCA CGCACTGGTT CTCGCGCGAA CGGCGCGGCG TCGTGCAGGG CTTCACGCAT
TCGTTCTCGC GGCTCGGCAA CGCGGTCACG CCGCCGATCG TCGCCGCGCT GATGACGTGG
CTGTCGTGGC GCGCGGCATT CTTCGTGATC GGTGCGGTGA CAATGGTGTG GCTCGTGTGG
TGGGTCGTCG GCTTCCGCGA GTACCCGCGC GGAGAAAGCG ACGGCAATGG CGTCGGCCGC
ACGCACACCG CTGCGACCGC CCGCCGGGCA GCGCCATCCG GCCCGACGCC GTGGGGGCCG
CTGTTCCGTC GGATGGCGCC GACGATCTTC GTGTACTTCT GCTACGGCTG GACCGCGTGG
CTGTTCTTCA CGTGGCTGCC GACCTTCTTC CTGAACGGCC AGGGCCTTAA CCTGAAATCG
ACCGCGCTGT TCGCGTCAGG CGTGTTCTTC GCGGGCGTGG TCGGCGACAC GCTCGGCGGC
TGGCTGTGCG ACCGCATCTA TCGCAAGACC GGCAACCTCG CGCTGTCGCG CCAGAGCGTG
ATCGTCACGA GCTTCACCGG CGCGCTCGTC TGCCTGCTGC CGCTCGCGTT CGTGCATTCG
ACGGCCGGCA TCGCGCTGTG CCTGTCCGGG TCGTTCCTGT GCCTCGAACT GACGATCGGG
CCGATCTGGG CCGTGCCGAG CGACATCGCG CCGCAACACG CGGGCATCGC AAGCGGAATG
ATGAACGCGG GTTCGGCGAT CGCGGGGATC CTGTCGCCGA TCCTGTTCGG CTATCTCGTC
GATCGCACCG GCAGCTGGAC GGTGCCGTTC GTCGGGTCGG TCGCGATGCT GCTGATCGGC
ATCGTCGCCG CGCTGCGGAT CCGGCCGGAT CGCGCGTTGT CGGAAGCGAC GCCGCCGCTC
GCCGAAGCGC CGGTTGCACC GTCGGCGCGC TGA
 
Protein sequence
MPTDHRQRRH TLWLLCALSF ILYVDRVNLA TAAGAIKAEL GLSNTELGIA FSAFAYSYAI 
CQIGGGWIAD RFGARITLIG CGLIWVASTF MTGLVHSLAL LFAARLLLGI GEGATLPAQA
RAITHWFSRE RRGVVQGFTH SFSRLGNAVT PPIVAALMTW LSWRAAFFVI GAVTMVWLVW
WVVGFREYPR GESDGNGVGR THTAATARRA APSGPTPWGP LFRRMAPTIF VYFCYGWTAW
LFFTWLPTFF LNGQGLNLKS TALFASGVFF AGVVGDTLGG WLCDRIYRKT GNLALSRQSV
IVTSFTGALV CLLPLAFVHS TAGIALCLSG SFLCLELTIG PIWAVPSDIA PQHAGIASGM
MNAGSAIAGI LSPILFGYLV DRTGSWTVPF VGSVAMLLIG IVAALRIRPD RALSEATPPL
AEAPVAPSAR