| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5072 |
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| Symbol | pdxA |
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| ID | 4313963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 2096006 |
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| End bp | 2097052 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638152915 |
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| Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
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| Protein accession | YP_776955 |
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| Protein GI | 115359817 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
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| TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACCG CCGCCGCCCT GCCCGTCGTC GCGCTGACGC TCGGCGACCC CGCCGGCATC
GGCGCCGAAC TGATCGCGAA ACTGCTCGCG CGGCCCGACG CGACGCGCCG CGCGAACCTC
GTGCTGATCG GCGACCGCTG GCTGTGGGAA GCCGGCCAGC GCGTGGCCGG CGTGACGGTC
GAGGTCGAGC CCGCCGAATC GCTCGCCGCC GTGCGCGGCC GGCCGTCCAC CGCGCGCGCC
GCGTTCGTCG CGGTCGACAC GATCGATCCC GCGCAGGTCA CGGTCGGCCA GCCCGGCGCG
GCCGGCGGCC GCTCGACGCT GACCGTGCTC GACCAGTGTC TGGACGCCGC GCTCGCCGGC
GACATCGACG CGATCTGCTT CGCGCCGCTG AACAAGTACG CGATGAAGCT CGGCGGGCTC
AGGCACGACG ACGAGCTGCA TCACTTCGCG GCCGCGCTCG GCGTGACCGG CTACTTCTGC
GAATTCAACA CGCTCGGCGA ACTGTGGACC GCGCGCATCT CGTCGCATAT TCCACTGAAG
GAAGCGGCGG CCCAATTGAG CGTCGAGCGC ATCGAACAGG CGTCCGAACT GATTTACCGG
TCGTTGCTCG CGAACGGCGT CGCGACGCCG AAGGTCGCGA TCGCCGCGTT CAACCCGCAC
GGCGGCGACG GCGGCAGCTG CGGCCGCGAG GAAGTCGACA TCATCGAGCC GGCGGTGCGC
AAGCTGCAGG CGCGCGACTG GCCGACCGAC GCGCCGTTCC ACGGCCCGTT CCCCGCCGAC
ACGATCTTCC TGAAGGCGCA GGCCGGCGAC TACCAGGCGA TCGTCACGAT GTACCACGAC
CAGGGGCAGA TCGCGATCAA GCTGCTCGGC TTCTCGCGCG GCGTGACCGT GCAGGGCGGG
CTGCCCGTGC CGATCACGAC GCCCGCGCAC GGCACCGCGT ATGACATCGC GGGGCGCGGC
ACGGCCGACG TCGGCGCGAC CTGGCAGGCG CTGCAGATCG CCTGCCGGAT GGGCGCCGCG
CGCCGCACGC CCACCGTTTC GGCGTGA
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| Protein sequence | MTTAAALPVV ALTLGDPAGI GAELIAKLLA RPDATRRANL VLIGDRWLWE AGQRVAGVTV
EVEPAESLAA VRGRPSTARA AFVAVDTIDP AQVTVGQPGA AGGRSTLTVL DQCLDAALAG
DIDAICFAPL NKYAMKLGGL RHDDELHHFA AALGVTGYFC EFNTLGELWT ARISSHIPLK
EAAAQLSVER IEQASELIYR SLLANGVATP KVAIAAFNPH GGDGGSCGRE EVDIIEPAVR
KLQARDWPTD APFHGPFPAD TIFLKAQAGD YQAIVTMYHD QGQIAIKLLG FSRGVTVQGG
LPVPITTPAH GTAYDIAGRG TADVGATWQA LQIACRMGAA RRTPTVSA
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