| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5039 |
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| Symbol | |
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| ID | 4313930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 2057528 |
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| End bp | 2058736 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638152882 |
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| Product | tRNA synthetase, class II (G, H, P and S) |
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| Protein accession | YP_776922 |
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| Protein GI | 115359784 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0441] Threonyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.115182 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGATT TCGATCACCG CGTGCTCGGC AACAAACTCG ATCTTTTTCA TCAGCAGGAT
GAAAGTCCGG GCGCCATCTT CTGGCATCCA CGCGGGATGG TCCTTTATCG GGTTGTCGAG
GAATATATTC GGGTCCGGAT GCGTCAGGCC GCCTTTGCTG AAGTGCGGAC TCCTCAGATC
GTGTCGCGCG ATCTTTGGGA ACAGAGCGGT CACTGGGAGA AATTCGGGCG AAACATGTTT
TCTCTCGAAA GTGACAATAA CCCGTACTGT CTCAAACCGA TGAGTTGTCC GTGCCATGTG
CAGATTTTCA AAAAAGGCAG TCGGTCGTAC CGCGATCTCC CGATCCGATA TTCCGAATTT
GGGGCCGTCC ATCGGGCCGA ACCATCCGGG GCGCTACATG GCCTCATGCG TGCCCGTGCG
TTTACGCAGG ACGACGCTCA TGTGCTTTGC ATGCCGGATC AGGTCGAGAT TGAAGTCGCA
CGATTTTGCG TATTGCTGAA GACGATCTAC GCAGACTTCG GATTCGGCGA ATTCGATGTG
GCTTTGTCGA CGAGGCCGGC GGTTCGCGCG GGTGACGATG CGGTCTGGGA TCGCTCGGAA
GCGATGCTGG CATCCGCTGC GCGGGCAGCG GGTCTGGATT TCGCGATCCA GGCGGGAGAA
GGGGCGTTCT ACGGCCCCAA GCTCGAATTT CATCTGTTCG ACCGTCAAGG GCGGAAGTGG
CAGTGCGGGA CGATCCAGCT CGATTTCGTA TTGCCGGAGC GGCTCGGTGC GGCATATGTT
GCGGAGGACG GTGCGAAGGC GACGCCCGTC ATGTTGCACC ACGCAGTGCT GGGAAGCCTC
GAACGGTTTA TCGGGATTCT TCTCGAACAC TACGAGGGAT GGTTGCCCAC TTGGCTGGCA
CCGGACCAGA TCGTCGTTGC GAACATTGGG AAGGATGACC GCGCATTCGC CGACAACACG
GCGTTCGCCT TCGAAGACAT CGGCTGTCGG GTGCTGCGCG ATTTCCGTGC CGAACGCCTG
CCGCGCAAGA TCTTCGATGC AAGGGAACTG GCCGCGCCGA TTGTCGCGAT AGCAGGACGC
AAAGAGGCGC TGGCTGGCGA AGTGTCGTTA CGATTGAGAG ATGGGGAGCA GCACGTGCTG
ACGATCAACG ATGCACTCGC GTACCTGAAG CAGCACGCGT GCGTCCCGTC TGCGACGCGG
GTGTTCTGA
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| Protein sequence | MDDFDHRVLG NKLDLFHQQD ESPGAIFWHP RGMVLYRVVE EYIRVRMRQA AFAEVRTPQI
VSRDLWEQSG HWEKFGRNMF SLESDNNPYC LKPMSCPCHV QIFKKGSRSY RDLPIRYSEF
GAVHRAEPSG ALHGLMRARA FTQDDAHVLC MPDQVEIEVA RFCVLLKTIY ADFGFGEFDV
ALSTRPAVRA GDDAVWDRSE AMLASAARAA GLDFAIQAGE GAFYGPKLEF HLFDRQGRKW
QCGTIQLDFV LPERLGAAYV AEDGAKATPV MLHHAVLGSL ERFIGILLEH YEGWLPTWLA
PDQIVVANIG KDDRAFADNT AFAFEDIGCR VLRDFRAERL PRKIFDAREL AAPIVAIAGR
KEALAGEVSL RLRDGEQHVL TINDALAYLK QHACVPSATR VF
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