Gene Bamb_5036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5036 
Symbol 
ID4313927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2054009 
End bp2055211 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content63% 
IMG OID638152879 
Producthypothetical protein 
Protein accessionYP_776919 
Protein GI115359781 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3386] Gluconolactonase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.339118 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAAGC GCTCGAATCG AGTCACGGCA ATTGCGTTCG CCTTTGCCTT CATCAGTTGC 
GCGACTGCAG CGACTGCGGC GGCCGATACC CGGCTCGAGC GCTGGCGAAG CTATGCCGGA
GTAAGTTGGG AGACTCCGAA AGGCGATGGG GATCCCGCGC CGTTCGCAGG CTCGGTCAAT
GCACCGATTG CCGGCCTTCA TTTCGATGCA CGCGGCGCCG CATACGTGAG TACGCCGCGC
TTCGTCGCGG CATCGACGCC GGCGACGCTC AGCAGGCTGG ATACGCGATC GACGACCGGC
CCGGCGCGGC TGACGCCATT TCCGTCGATG GAAGGCAATG CCATATCGAC CGCGCCTGCC
GAGCATTTGC GCAACGTGCT GGGCTTTTAC GTCGACCGCA CAAACGATTG GTTATGGGCG
CTCGACATGG GGTTCGTTGC CGGCGAATCC GAAGCACCCG CGGGCGCCCA GAAAATCGTG
GTGTTCGATC TGAAGTCGGG ACGAATTGTG AAGCGCATCG GCCTCGACGG CGTGGCCGAT
CGTGCCGGCA GTTTCCTCAA CGACATCGTG GTCGACGAAC GCAGGCGCAT TGCCTACGTT
TCCGACAGTG GCTCGCGCAG TGCGCCCGAT AACAAGGTGG GCTTGATTGT TGCCGACTTC
GCTTCGGGTA CCGCACGGCG TGTGCTGGAC AGGCATCCGG ATTTGCAGGT CGAAGCGGGG
GTGAAGGTCG TTTCCCATGG CGCTGAAGTA TGGCCGGGAA AGCCGCTGCT GATCGGTATC
AACGGAATCG CGCTGTCGCC GGACGGCGCA ACGCTGTACT GGACGGTGAC GACGGGGACA
CGCGTACGTT CGGTTCCGAC CGCCGTTCTG AGACAGCACG GTTCGACGGA TGCCGAGATT
GCCGCGGAGA TTCGTGATCT TGGCGCCGTT GGCAGCAATA CGGACGGCAT GGTGACGGAT
TCGCGGGGCG CGCTCTACAT TACCGACGTC ACGCATAACG GCATTGTGAA GTACGAACCG
CGCACGGGGG CGATGTCGTT GATCGCATCT GACGATGGCG TGCATTGGCC GGATACGCCG
GCGGTGCTGC CGAATGGCGA TCTGGTCTTT ACGGCTAGTG CGCTGAATGA TCACGTCGCG
GGGCGGGTCG CCAGTGGGCA CGAGCGCTAC GAGTTGTGGC GGATGTCGAT TGGGGGCAAG
TGA
 
Protein sequence
MFKRSNRVTA IAFAFAFISC ATAATAAADT RLERWRSYAG VSWETPKGDG DPAPFAGSVN 
APIAGLHFDA RGAAYVSTPR FVAASTPATL SRLDTRSTTG PARLTPFPSM EGNAISTAPA
EHLRNVLGFY VDRTNDWLWA LDMGFVAGES EAPAGAQKIV VFDLKSGRIV KRIGLDGVAD
RAGSFLNDIV VDERRRIAYV SDSGSRSAPD NKVGLIVADF ASGTARRVLD RHPDLQVEAG
VKVVSHGAEV WPGKPLLIGI NGIALSPDGA TLYWTVTTGT RVRSVPTAVL RQHGSTDAEI
AAEIRDLGAV GSNTDGMVTD SRGALYITDV THNGIVKYEP RTGAMSLIAS DDGVHWPDTP
AVLPNGDLVF TASALNDHVA GRVASGHERY ELWRMSIGGK