Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5036 |
Symbol | |
ID | 4313927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 2054009 |
End bp | 2055211 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638152879 |
Product | hypothetical protein |
Protein accession | YP_776919 |
Protein GI | 115359781 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3386] Gluconolactonase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.339118 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAAGC GCTCGAATCG AGTCACGGCA ATTGCGTTCG CCTTTGCCTT CATCAGTTGC GCGACTGCAG CGACTGCGGC GGCCGATACC CGGCTCGAGC GCTGGCGAAG CTATGCCGGA GTAAGTTGGG AGACTCCGAA AGGCGATGGG GATCCCGCGC CGTTCGCAGG CTCGGTCAAT GCACCGATTG CCGGCCTTCA TTTCGATGCA CGCGGCGCCG CATACGTGAG TACGCCGCGC TTCGTCGCGG CATCGACGCC GGCGACGCTC AGCAGGCTGG ATACGCGATC GACGACCGGC CCGGCGCGGC TGACGCCATT TCCGTCGATG GAAGGCAATG CCATATCGAC CGCGCCTGCC GAGCATTTGC GCAACGTGCT GGGCTTTTAC GTCGACCGCA CAAACGATTG GTTATGGGCG CTCGACATGG GGTTCGTTGC CGGCGAATCC GAAGCACCCG CGGGCGCCCA GAAAATCGTG GTGTTCGATC TGAAGTCGGG ACGAATTGTG AAGCGCATCG GCCTCGACGG CGTGGCCGAT CGTGCCGGCA GTTTCCTCAA CGACATCGTG GTCGACGAAC GCAGGCGCAT TGCCTACGTT TCCGACAGTG GCTCGCGCAG TGCGCCCGAT AACAAGGTGG GCTTGATTGT TGCCGACTTC GCTTCGGGTA CCGCACGGCG TGTGCTGGAC AGGCATCCGG ATTTGCAGGT CGAAGCGGGG GTGAAGGTCG TTTCCCATGG CGCTGAAGTA TGGCCGGGAA AGCCGCTGCT GATCGGTATC AACGGAATCG CGCTGTCGCC GGACGGCGCA ACGCTGTACT GGACGGTGAC GACGGGGACA CGCGTACGTT CGGTTCCGAC CGCCGTTCTG AGACAGCACG GTTCGACGGA TGCCGAGATT GCCGCGGAGA TTCGTGATCT TGGCGCCGTT GGCAGCAATA CGGACGGCAT GGTGACGGAT TCGCGGGGCG CGCTCTACAT TACCGACGTC ACGCATAACG GCATTGTGAA GTACGAACCG CGCACGGGGG CGATGTCGTT GATCGCATCT GACGATGGCG TGCATTGGCC GGATACGCCG GCGGTGCTGC CGAATGGCGA TCTGGTCTTT ACGGCTAGTG CGCTGAATGA TCACGTCGCG GGGCGGGTCG CCAGTGGGCA CGAGCGCTAC GAGTTGTGGC GGATGTCGAT TGGGGGCAAG TGA
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Protein sequence | MFKRSNRVTA IAFAFAFISC ATAATAAADT RLERWRSYAG VSWETPKGDG DPAPFAGSVN APIAGLHFDA RGAAYVSTPR FVAASTPATL SRLDTRSTTG PARLTPFPSM EGNAISTAPA EHLRNVLGFY VDRTNDWLWA LDMGFVAGES EAPAGAQKIV VFDLKSGRIV KRIGLDGVAD RAGSFLNDIV VDERRRIAYV SDSGSRSAPD NKVGLIVADF ASGTARRVLD RHPDLQVEAG VKVVSHGAEV WPGKPLLIGI NGIALSPDGA TLYWTVTTGT RVRSVPTAVL RQHGSTDAEI AAEIRDLGAV GSNTDGMVTD SRGALYITDV THNGIVKYEP RTGAMSLIAS DDGVHWPDTP AVLPNGDLVF TASALNDHVA GRVASGHERY ELWRMSIGGK
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