Gene Bamb_5016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5016 
Symbol 
ID4313907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2035366 
End bp2036598 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content67% 
IMG OID638152859 
Product4-hydroxybenzoate 3-monooxygenase 
Protein accessionYP_776899 
Protein GI115359761 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 
TIGRFAM ID[TIGR02360] 4-hydroxybenzoate 3-monooxygenase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACCC AGGTCGCCAT CATCGGCGCC GGTCCGTCCG GCCTTTTGCT TTCCCATCTG 
CTGCGCCTGC AGGGCGTGGA TACCATCCTC GTCGAAGCGC GTTCGCGCGA ATATTGCGAG
AACCGCATTC GTGCCGGCGT GCTGGAACAG GGCACCGTCG ACACGCTGAA CGAAGCCGGC
GTCGGCGAGC GGATGCGCCG CGAAGGGCTC GAGCATCACG GCATCGAGCT GCTGTTCTCC
GGCCAGCGCC ATCGCATCGA TTTGAGCGCG CTCACCGGCG GGCGCGCGAT CACCGTCTAC
AGCCAGCACG AAGTCGTGCG CGACCTGATC GCGGCCGGCG ACGCGCATGG CCACGCGATG
CACTTTGAAG TCACCGACGT CGCGCTGCAC GATGTCGAGA GCGAGCACCC GTTCGTCACG
TTCAAGCACG CGGACGGCCG CGCGGACCGC ATCGACTGCG ACTACATCGC CGGCTGCGAC
GGCTTCCACG GCATCGCGCG CCAGACGATT CCCGCCGAGC GGCTGAACAC GTTCGAGCGC
GTGTATCCGT TCGCATGGCT CGGCATCCTC GCCGACGCGG CGCCGTCGCT CGACGAACTC
GTCTACGCGC ATCACGAGAA CGGCTTCGCG CTGTTCTCGA TGCGCTCGCC GACGGTCACG
CGCCTCTATC TGCAATGCAA GCCCGACGAA AACCTCGCCG AATGGTCCGA TGCGCGGATC
TGGGACGAAC TGCACACGCG CTTCTCGAAC GACACCGGCT GGACGCCGAC CGAGGGCCGG
ATCACGCAGA AGAGCGTGAC GCCGATGCGC AGCTTCGTCT CGGAGACGAT GCAGCACGGC
CGCCTGTTCC TCGCCGGCGA CGCCGCGCAC ATCGTGCCGC CGACCGGCGC GAAGGGGATG
AACCTCGCGG TGGCCGACGT CCGCGCGCTG TCCCGGGCGC TCGGCGCCCG CTACCGCGAC
GGCGACGCGA CGCCGCTCGA GCGCTATTCG GCGACCTGTC TCGAACGCGT GTGGCGCGCC
GAGCATTTCT CGTACTTCAT GACGAACATG CTGCATGCGT CGCCGGACGA CTCGCCGTTC
GTCAATCGCC TGAAGTTTGC CGAACTGAAA TACGTGACGC GCTCGCGGGC CGCCGCGCAG
TCGCTGGCCG AAAACTACGT CGGCCTGCCG TTCGACGACC AGCCGACCCC CGAGGGATCC
CGCCTTGACA ACGCGCTGTG CGCGACTCTA TGA
 
Protein sequence
MRTQVAIIGA GPSGLLLSHL LRLQGVDTIL VEARSREYCE NRIRAGVLEQ GTVDTLNEAG 
VGERMRREGL EHHGIELLFS GQRHRIDLSA LTGGRAITVY SQHEVVRDLI AAGDAHGHAM
HFEVTDVALH DVESEHPFVT FKHADGRADR IDCDYIAGCD GFHGIARQTI PAERLNTFER
VYPFAWLGIL ADAAPSLDEL VYAHHENGFA LFSMRSPTVT RLYLQCKPDE NLAEWSDARI
WDELHTRFSN DTGWTPTEGR ITQKSVTPMR SFVSETMQHG RLFLAGDAAH IVPPTGAKGM
NLAVADVRAL SRALGARYRD GDATPLERYS ATCLERVWRA EHFSYFMTNM LHASPDDSPF
VNRLKFAELK YVTRSRAAAQ SLAENYVGLP FDDQPTPEGS RLDNALCATL