Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4969 |
Symbol | |
ID | 4313860 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 1986766 |
End bp | 1987779 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638152812 |
Product | phage integrase family protein |
Protein accession | YP_776852 |
Protein GI | 115359714 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.188705 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.373928 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCTTC CCACGCCCTC CGACACCCCT GCACGCCCGG AAGAAAAGGA TCTGTTCGAC CGCGGCGCAT CCGACTGGAT CGTGTCGCCC GAAACCGCAT TCGACGCGTG GCTTGCCATG CAGGACTACC GCCGTTCGTC AGCCGACGTC TATCGCGCCC AATGGGGTGC GTTTCTCACG TGGCTGCGGG CCCACCAGAA AAACCTGGCG ACAGTCGATA CCGCATCGAT CGCGAACTTC GTCGGCGAGC TGCCTATCCG GAAAACGCAG CGCATGCGCT ATCTTCGGCT GATCGAGCGC GTGCTCGACC ACATCCGGCG CACCGAGCTC GCGTCCACCA ATCCGGCCCG CTTCATTGCT CAGGATGGCG AAGCGAACTG GCGCCAGGCA CGCGACAACG AGCCGACCGG TTTCCTCACA CCGGCCGAAC GCGCGAAGCT GCTGGCTTAC CTGTTTTCGC CGATCGGCGT ATCGGGCTCC GCGTACTGGA AAGAGCGGCG CGACCGCGCG CTCGTCGCTG CGTTTCTCGG CGCCGGCGTG AAGACCGGCG AAGCACGGGC GCTTACTATT AGTTGCATCA ACACGAGCGG AACGTCGCTC CAGATCCCGT CGACGCATCC GGATTTCGCA CGCGAAACCC ATCTGGCGTC GTTCGCGATC GCGTTGCTCG AGGCGTGGCT CGTGGAGCGC AAGCGTCAGG AGATTCCCGG CGAACTCGTG TTTCCGGCGT CGCACACCGG ACGGCCGATG CACAAGGCGA CGATGCTGCG CGCGATCGAT GCGATCGTCG AATCGGCGGG GCTCACGTCG TCGCGCAGCG CGCGCGCGAG CCCGCAAACG CTGCGCAACA CGTATGCGGC CGAACTGTTC GAACACGACG TGCCGCCCGA GCGGGTCGGC AAATGGCTCG GCTTCATGCG GCCGATCTCG TCGAACCGCC TGCATCGCGC ATGGAAAAAC TGGCGCGACG GTCTCGCCAA CGGTGACGCG CTCGTCCCCG ACGAAACTCA CTGA
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Protein sequence | MSLPTPSDTP ARPEEKDLFD RGASDWIVSP ETAFDAWLAM QDYRRSSADV YRAQWGAFLT WLRAHQKNLA TVDTASIANF VGELPIRKTQ RMRYLRLIER VLDHIRRTEL ASTNPARFIA QDGEANWRQA RDNEPTGFLT PAERAKLLAY LFSPIGVSGS AYWKERRDRA LVAAFLGAGV KTGEARALTI SCINTSGTSL QIPSTHPDFA RETHLASFAI ALLEAWLVER KRQEIPGELV FPASHTGRPM HKATMLRAID AIVESAGLTS SRSARASPQT LRNTYAAELF EHDVPPERVG KWLGFMRPIS SNRLHRAWKN WRDGLANGDA LVPDETH
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