Gene Bamb_4887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4887 
Symbol 
ID4313778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1891868 
End bp1892545 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content68% 
IMG OID638152730 
Producthypothetical protein 
Protein accessionYP_776770 
Protein GI115359632 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0530643 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATCGA AGTACCGTAC GATCGTGGCT GTCCCCTGCC GATGCGGGCC GTCGTTCGAC 
GCCGGCGGCA CGACGCACCA TCCGTCCGTG ATTGACGTTC GCAACCTGAC CCGACCCGCC
AAGATGACCG TATCCGAACT GCTCAGCGCC ATCCGCCAGC CCTACGCCGA CCTGCTCGCG
CAAGCGGCGG CGCAACCGGT GGCCGTCGTC GAACCGGCCT ACCGGAAAGC CGACGGCACG
CTCGCCACCG AAGGCCCGCT CGCGCTGCCG TGCCGCGCCG ATTTCGTTCA CACCGGAGGC
GAATCGGCCG GCCAGCCGGC GATGGTCGAC TCGAATGCGC AACTGGATTT CGAACCGTTC
GCGTTCGAAC TCGACACGGC GGCCGTGTCG ATCCAGCCAT TCGTGTGGGA CTGGGTGACG
GTCGAAGCCG ACGGTTTCGA CGAAGCCGCG GCCACCGACG CGTTCAAGGC ATGGTTCTTC
GCGTGGTTCG ACGCCGACGA CGCACGCGTG CCGGCCGAGG ACGGCCTGCA CGGCGTCGTT
CACTATCTGT CGGAGCCGGT ACGCACGGAG CACGGATGGC AGGTCAACGC GGATCTCGGT
TCGGCGCCGG GAGCCGCCGT CGAGGACTTG CTGTTCCGGC TCGTCGATGC GGGCGCCACG
CGGATCAGCA TCGGCTGA
 
Protein sequence
MPSKYRTIVA VPCRCGPSFD AGGTTHHPSV IDVRNLTRPA KMTVSELLSA IRQPYADLLA 
QAAAQPVAVV EPAYRKADGT LATEGPLALP CRADFVHTGG ESAGQPAMVD SNAQLDFEPF
AFELDTAAVS IQPFVWDWVT VEADGFDEAA ATDAFKAWFF AWFDADDARV PAEDGLHGVV
HYLSEPVRTE HGWQVNADLG SAPGAAVEDL LFRLVDAGAT RISIG