Gene Bamb_4742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4742 
Symbol 
ID4313634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1735190 
End bp1736026 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content61% 
IMG OID638152586 
Productalpha/beta hydrolase fold 
Protein accessionYP_776626 
Protein GI115359488 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATTCG TTACCACGCA AGACGGCGTC CAGATTTTTT ACAAGGACTG GGGCCCGAAA 
GACGCGCAGC CGATCGTCTT CCATCACGGC TGGCCGCTTT CGTCGGATGA TTGGGATGCC
CAGATGTTGT TTTTCCTGTC GAACGGGTAT CGCGTCATTG CCCACGACCG GCGCGGACAT
GGGCGCTCCG CGCAAGTCGC CGAAGGTCAC GACATGGACC ATTACGCAGC CGATGCGTTC
GCCGTTGTCG AAGCGCTGGA TCTCCGGCAT GCAGTGCATA TCGGCCACTC CACCGGCGGC
GGTGAAGTCG CCCGCTATGT CGCGAGGCAC GGCGAGCCGG CCGGGCGTGT CGCCAAAGTG
ATACTGGTCA GCGCGGTGAC ACCGCTGATG CTGAAGACCG AGGCCAACCC GGACGGCGTG
CCAATCGACG TATTCGACGG GTTGCGCACC GGCACCGCGG CCAATCGCGC CCAGTTCTTT
CTCGATGTGC CGAGCGGCCC GTTTTACGGA TTCAATCGAG CCGGCGCGAA GATCGATCAA
GGCGTGATTC GGAACTGGTG GCGCCAGGCG ATGATGGGCA GCGCCAACGC GCATTACGAG
GGCATCAAGG CGTTCTCCGA GACGGACCAG ACCGACGATC TCAAGGCGAT CAGCGTGCCG
ACGCTCGTAC TGCATGGCGA AGACGACCAG ATCGTCCCGT ATGAGAATGC TGCGCTGAAG
GCCATCAAAC TGCTGAAGAA CGGCACGTTG AAGACCTATC CGGGCTACGG CCACGGCATG
CTGACGGTCA ATGCCGATGT GCTCAATGCG GATCTCCTCG CTTTCGTGAA GGCTTGA
 
Protein sequence
MSFVTTQDGV QIFYKDWGPK DAQPIVFHHG WPLSSDDWDA QMLFFLSNGY RVIAHDRRGH 
GRSAQVAEGH DMDHYAADAF AVVEALDLRH AVHIGHSTGG GEVARYVARH GEPAGRVAKV
ILVSAVTPLM LKTEANPDGV PIDVFDGLRT GTAANRAQFF LDVPSGPFYG FNRAGAKIDQ
GVIRNWWRQA MMGSANAHYE GIKAFSETDQ TDDLKAISVP TLVLHGEDDQ IVPYENAALK
AIKLLKNGTL KTYPGYGHGM LTVNADVLNA DLLAFVKA