Gene Bamb_4721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4721 
Symbol 
ID4313613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1712882 
End bp1714072 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content69% 
IMG OID638152565 
Productamidohydrolase 
Protein accessionYP_776605 
Protein GI115359467 
COG category[R] General function prediction only 
COG ID[COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase 
TIGRFAM ID[TIGR01891] amidohydrolase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCG ACGTCCGATT CACCGAAATC GAGGATCTGA TGCCCGCCGC CGCCGGGCTG 
CGCGAGATCC GCCATCACAT TCACCACCAC CCGGAACTCG CGTACGAGGA GCACGAAACG
GCCGCGCTCG TTGCCGACAA GCTCGAGCAA TGGGGCTGGC AGGTGACGCG CGGGGTCGGG
CAGACGGGGG TGGTCGGCAC GCTGCGGGTC GGCGACGGCA CGCGCCGCAT CGGCATCCGC
GCGGACATGG ATGCGCTGCC GATCCTCGAG GCGACGGGCC TGCCGTATGC AAGCGGCACG
CACGGCAAGA TGCACGCGTG CGGCCACGAC GGCCACACGA CGATGCTGCT CGGCGCCGCG
CAGCATCTCG CGAAGACGCG CAACTTCTCC GGCACCGTGC ACCTGTATTT CCAGCCGGCC
GAAGAGCACG GCGTCGACAG CGGCGCGAAG AAGATGATCG ACGACGGCCT GTTCGAGCGT
TTTCCGTGCG ACGCGGTGTT CGGCATGCAC AACCATCCGG GCGCGGCGCC CGGCGTGTTC
CTCACGCGGC GCGGCCCGTT CATGTCGGCC GGCGACAAGG CGATCATCTC GATCGAGGGC
GTCGGCGGCC ACGCGGCGCG GCCGCACCTG ACGGTCGACC CGGTGGTCGT CGCGGCGAGC
ATCGTGATGG CGCTGCAGAC GATCGTCGCG CGCAACGTCG ACCCGTCGCA GCCGGCGGTC
GTCACGGTCG GCTCGATGCA CGCCGGCACC GCGAACAACG TGATTCCGAA CGGCGCGCGC
CTCGAGCTCA GCGTGCGTTC GTTCAGCCCG GAAGTGCGCG CGCTGCTGAA GCGCCGCATC
GTCGAGCTCG CCGAGTCGCA GGCCGCGAGC TACGGCGCGA CCGCACTCGT CGAGTACATC
GAAGGCTATC CGGTCGTCGT CAATACGGAT GCCGAAACGA ATTTTGCCGC GCAGGTCGCG
CGCGAGCTGG TCGGCGACGC GCACGTCGTC GAGCAGGCCG ACCTGCTGAT GGGCAGCGAG
GATTTCGCGT TCATGCTGCA GCAGCGGCCC GGCTCGTTCG TGCGGCTCGG CAATGGCGAA
GGGGAAGACG GCTGCATGGT GCACAACCCG AAGTACGACT TCAACGATCG CAATCTGCCG
ATCGGCGCGG CGTTCTGGAC GCGCCTCGTG GAGCGTTACC TCGGGCAGTA A
 
Protein sequence
MTTDVRFTEI EDLMPAAAGL REIRHHIHHH PELAYEEHET AALVADKLEQ WGWQVTRGVG 
QTGVVGTLRV GDGTRRIGIR ADMDALPILE ATGLPYASGT HGKMHACGHD GHTTMLLGAA
QHLAKTRNFS GTVHLYFQPA EEHGVDSGAK KMIDDGLFER FPCDAVFGMH NHPGAAPGVF
LTRRGPFMSA GDKAIISIEG VGGHAARPHL TVDPVVVAAS IVMALQTIVA RNVDPSQPAV
VTVGSMHAGT ANNVIPNGAR LELSVRSFSP EVRALLKRRI VELAESQAAS YGATALVEYI
EGYPVVVNTD AETNFAAQVA RELVGDAHVV EQADLLMGSE DFAFMLQQRP GSFVRLGNGE
GEDGCMVHNP KYDFNDRNLP IGAAFWTRLV ERYLGQ