Gene Bamb_4684 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4684 
Symbol 
ID4313576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1668708 
End bp1669919 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content71% 
IMG OID638152528 
Productacyl-CoA dehydrogenase type 2 
Protein accessionYP_776568 
Protein GI115359430 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGATC GCCGCGGCCC GGCGACGTTT GCGCCGGATT CCGATGCACG CGCGACCGAC 
GCCGATGCGC TGGCGCGCGC GATCGACTCG CTGCGTGCGA CGGCGGCCGC GCGCGACCGC
GCGGGCGGTC ATGCGGCCGG CGAGAAGCAG TGGCTCGCCG ACGCCGGCCT GCTGACGCTC
GCGGTGCCGC GCGAATTCGG CGGACAGGAA GCCGCCTGGC CGGCGATCTA CGACACGATC
CGGCAGATCG CGCGCGTCGA CAGCGCGCTC GCGCATCTGG TCGGGTTCCA GATCCTGCAG
ATCGTGAGCG TCGACGTGTG GGGCAGCGCG GCCCAGCGCG AACGCTATCT GCGCGGCACG
GTCGAGCATC GCTGGTGGTG GGGCAATGCG GTCAACCCGC TCGACACGCG GCTGGTGGCG
ACCGCGACGC CGGACGGCGG CTACCGGCTC GACGGCGTGA AGGGCTTCTG CTCGGGCACG
CGCGGCTCGC AGCGGATGAC CGTGTCCGCG CACGATCCGG AAACGGGCCG CACCGTGTTC
GGCGTGGTGC CGACCGATCG TGACGGGATC ACGGTCAACG AGGACTGGGA TCCGATCGGC
CAGCGCCAGA CCGACAGCGG CAGTGTGCGC TTCGACGGCG TGACGCTTGC GCCGGATGAC
GTGCTGCATC GCTCGGAAAC ACCGCCGACT CCGCGCGCGA CGCTGCGCAC GCTGGTGTCG
CAGCTGGTGC TGACGAATCT GTTCGTCGGG CTTGCCGAAG GCGCGCTCGC CGAGGCGCGC
GACTATGTGC TGAAGGATGG CCGGCCGTGG ATACATGCGG GCGTCGCGCA GGCGAGCGAC
GATCCTTATA CGCTGCAGCG CTTCGGCGAC ATGCGCGTGC GGGCGGTCGC GGCCGCATCG
CTGGCCGACC GCGCGGCGCG CGAGTTGGAG CGCGCATGGT CGCGGCGCGA TGCGCTGACG
GCCGACGAAC GTGCCGAAGT GGCGCTCGCC GTGTCGGAGG CGAAGATCGT CGCGCAGCGC
GCGGCGCTCG ACAATGGCGA GGCGCTGTTC GATGCGTGCG GCGCACGCGC GACGGCCGCG
TCGCTCGGCC TCGACCGCTT CTGGCGCAAC GCGCGCACGC ATACGCTGCA CGATCCGCTC
GACTATCGGA TGCGCGACGT CGGGCGGTTT GCGCTGACGG GAGAGTTGCC GCAGGCGTCG
CTTTATACGT GA
 
Protein sequence
MNDRRGPATF APDSDARATD ADALARAIDS LRATAAARDR AGGHAAGEKQ WLADAGLLTL 
AVPREFGGQE AAWPAIYDTI RQIARVDSAL AHLVGFQILQ IVSVDVWGSA AQRERYLRGT
VEHRWWWGNA VNPLDTRLVA TATPDGGYRL DGVKGFCSGT RGSQRMTVSA HDPETGRTVF
GVVPTDRDGI TVNEDWDPIG QRQTDSGSVR FDGVTLAPDD VLHRSETPPT PRATLRTLVS
QLVLTNLFVG LAEGALAEAR DYVLKDGRPW IHAGVAQASD DPYTLQRFGD MRVRAVAAAS
LADRAARELE RAWSRRDALT ADERAEVALA VSEAKIVAQR AALDNGEALF DACGARATAA
SLGLDRFWRN ARTHTLHDPL DYRMRDVGRF ALTGELPQAS LYT