| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4662 |
|---|
| Symbol | |
|---|
| ID | 4313554 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | + |
|---|
| Start bp | 1645368 |
|---|
| End bp | 1646477 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638152506 |
|---|
| Product | 2-aminoethylphosphonate--pyruvate transaminase |
|---|
| Protein accession | YP_776546 |
|---|
| Protein GI | 115359408 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase |
|---|
| TIGRFAM ID | [TIGR02326] 2-aminoethylphosphonate--pyruvate transaminase
[TIGR03301] 2-aminoethylphosphonate aminotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.743349 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.408285 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGATC CGATTCTGCT CACGCCCGGC CCGCTCACCA CGTCCGCCAC AACACGCCAC
GCAATGCAAC ATGACTGGGG CTCTTGGGAC GCCGCTTTCA ACCAGTTGAC GGCCAGCGTC
TGCGCGGACC TCGTCGCGAT CGCGCGCGGC GGCGACGATT ACGTGTGCGT GCCGATGCAA
GGCAGCGGCA CCTTTTCGGT CGAGGCCGCG CTCGGCACGC TGGTGCCGCG CGACCGCGTC
GTGCTGGTGC CCGACAACGG CGCGTATTGC GCGCGCATCC TGAAGATCCT CGGCCGGCTC
GGCATCGAAG CGATCGCATT GCCGTTCGGC GAGGACGCAG CGGTCGACCC GGCGGTGGTG
GAAGCCGCGT TCGCGCGCGA GCCGCGCATC ACGCATGTCG CGCTGGTGCA CCTGGAAACG
AGTGCCGGCA TCCTGAATCC GCTCGACGCG ATCGCGGCCG TGTGCCGGCG GCACGGCAAG
CGGCTGATCG TCGACGCGAT GAGTTCGTTC GGCGCGCTGC CGATCGCGCT GGCGGACAGC
GGGATCGACG CACTGGTGTC GGCGAGCGGC AAATGCCTGG AAGGCGTGCC GGGGATGGGG
TTCGCGATCG TGCGGCGCGA CGCGCTCGAC GCATGCGAAG GCAACTCGCC GTCGCTCGCG
CTCGACCTTC AGGATCAGCA CGCGTACCTG CGCAAGACGG GCCAGTGGCG CTTCACGCCG
CCGACCCACG TGATCGCCGC GCTGCGCGCC GCGCTCGACC AGTATCTCGC CGAAGGCGGC
CAGCCCGCGC GTGGCGCGCG CTATGCGGAG AACTGCCGGA CGCTGGTCGA ATCGATGCGC
GCGCTCGGCT TCGCGCCGTT CCTCGACGGC AGCGTGCAGG CGCCCGTGAT CGTCACGTTC
CACGCGCCCG ACCATCCGGC GTACGATTTC CGCCGCTTTT ACGACGCGGT GCGCGACGCG
GGCTTCATCC TGTATCCGGG CAAGCTGACG AAAGTGGAGA CGTTCCGTGT CGGCTGCATC
GGCGCGATCG ATGCCGGCGA CATCCGGCGC GCGGTCGCGG CGATCGCGCA GGCGCTCGAA
TCGCTCGGGA TTGCCATGCA GCGCGCGTGA
|
|---|
| Protein sequence | MPDPILLTPG PLTTSATTRH AMQHDWGSWD AAFNQLTASV CADLVAIARG GDDYVCVPMQ
GSGTFSVEAA LGTLVPRDRV VLVPDNGAYC ARILKILGRL GIEAIALPFG EDAAVDPAVV
EAAFAREPRI THVALVHLET SAGILNPLDA IAAVCRRHGK RLIVDAMSSF GALPIALADS
GIDALVSASG KCLEGVPGMG FAIVRRDALD ACEGNSPSLA LDLQDQHAYL RKTGQWRFTP
PTHVIAALRA ALDQYLAEGG QPARGARYAE NCRTLVESMR ALGFAPFLDG SVQAPVIVTF
HAPDHPAYDF RRFYDAVRDA GFILYPGKLT KVETFRVGCI GAIDAGDIRR AVAAIAQALE
SLGIAMQRA
|
|---|
| |