Gene Bamb_4641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4641 
Symbol 
ID4313533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1616043 
End bp1616666 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content68% 
IMG OID638152480 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_776525 
Protein GI115359387 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTCCA CGCATTTGCT GTTGATTTAT CTCGCCGCGC TGGCGGCCAT CTACGCGGTG 
CCCGGCCCCG ACATGGCGCT CGTGCTGCAG ACCAGCATCG GTCGCGGCGT GCGGCCGGGC
ATGGCGGCGG CGGCCGGCCT GTCGCTGTCG CGCACCGTGC ATGTAACGCT GTCCGCGTGC
GGCGTCGCGG CGCTGATCCG CAGCGCGCCG TGGCTGTATG AAGCGATCCG CTACGGCGGC
GCGCTGTATC TCGCGTACGT CGCGATCCAG GTGTTCCGCT CGCCGGTGTT TGCACTCGGC
GACGGCGACG CCGCCGCCGC GGGCGAACTG CGTCAGTCGT TCTTCAAGGG GTTGCTGACA
AACCTGCTGA ACCCGAAGGC GCTGCTGTTC TGCTCGGTGC TGCTGCCACA ATTCGTGCGG
CCCGAGGCCG GGCCTGTCGT GTTGCAGATG TTCGAACTCG GCGCGATGCT CGTCGCGGCC
GGCGTGTGTT TCGACCTCGC ATGCGTGTTC GGCGCGTCGC GCATCGCGGC GTGGATGCGC
GCGCATCCGC TCGCGCAGAC GGTGCAGCGC TGGACCTTCT CGGCGGCGCT GATCGGCTTC
GCGCTGCGCT TGTCGATGGA CTGA
 
Protein sequence
MISTHLLLIY LAALAAIYAV PGPDMALVLQ TSIGRGVRPG MAAAAGLSLS RTVHVTLSAC 
GVAALIRSAP WLYEAIRYGG ALYLAYVAIQ VFRSPVFALG DGDAAAAGEL RQSFFKGLLT
NLLNPKALLF CSVLLPQFVR PEAGPVVLQM FELGAMLVAA GVCFDLACVF GASRIAAWMR
AHPLAQTVQR WTFSAALIGF ALRLSMD